RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 WNT6Q9Y6F9 365 aa11.9□□□□□ -0.5
SRRT-211ENST00000478693 GREB1Q4ZG55 1949 aa11.9□□□□□ -0.51
SRRT-211ENST00000478693 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 SYNJ2BP-COX16A0A087WUM0 186 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 CHADO15335 359 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 MSI1O43347 362 aaKnown RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 ADCY5O95622 1261 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 GLI1P08151 1106 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 UNGP13051 313 aaPredicted RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 TCF3P15923 654 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 MMP8P22894 467 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 GABRB2P47870 512 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 YWHAZP63104 245 aaKnown RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 COG7P83436 770 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 DCAF6Q58WW2 860 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 TRIM68Q6AZZ1 485 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 ACAD10Q6JQN1 1059 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 DNAJC24Q6P3W2 148 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 SLC26A9Q7LBE3 791 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 DEFB106AQ8N104 65 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 RIN3Q8TB24 985 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 DNASE1L2Q92874 299 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 SELENOOQ9BVL4 669 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 KLF16Q9BXK1 252 aaPredicted RBP11.89□□□□□ -0.51
SRRT-211ENST00000478693 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 GKN1Q9NS71 199 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 ASNSD1Q9NWL6 643 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 COX16Q9P0S2 106 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 WDR35Q9P2L0 1181 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 STAP1Q9ULZ2 295 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 NAALADL1Q9UQQ1 740 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 REV3LO60673 3130 aa11.89□□□□□ -0.51
SRRT-211ENST00000478693 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 DDX3XO00571 662 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRRT-211ENST00000478693 SLC9A3R1O14745 358 aaPredicted RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 NFATC1O95644 943 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 DESP17661 470 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 CORO1AP31146 461 aaKnown RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 SCNN1AP37088 669 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 SULT1E1P49888 294 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 CDK17Q00537 523 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 SIGLEC14Q08ET2 396 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 FCHO2Q0JRZ9 810 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 PDGFRLQ15198 375 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 TAF5Q15542 800 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 MSANTD2Q6P1R3 559 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 MON1BQ7L1V2 547 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 PHF13Q86YI8 300 aaPredicted RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 CPA6Q8N4T0 437 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ZNF276Q8N554 614 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 DQX1Q8TE96 717 aaKnown RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRRT-211ENST00000478693 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 RNF34Q969K3 372 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 PLD4Q96BZ4 506 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ZNF653Q96CK0 615 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ZFRQ96KR1 1074 aaKnown RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 EBF3Q9H4W6 596 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 SLC2A4RGQ9NR83 387 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRRT-211ENST00000478693 TBC1D14Q9P2M4 693 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 ADAMTS1Q9UHI8 967 aa11.88□□□□□ -0.51
SRRT-211ENST00000478693 HBS1LQ9Y450 684 aaKnown RBP11.88□□□□□ -0.51
SRRT-211ENST00000478693 BRWD1Q9NSI6 2320 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 STK25O00506 426 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 AKR1B10O60218 316 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 STC2O76061 302 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 APOEP02649 317 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 ARSAP15289 507 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 CDC25BP30305 580 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 GBP1P32455 592 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
SRRT-211ENST00000478693 HARS2P49590 506 aaKnown RBP11.87□□□□□ -0.51
SRRT-211ENST00000478693 TBX4P57082 545 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 ZXDBP98169 803 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 TNK2Q07912 1038 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 NR1H3Q13133 447 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
SRRT-211ENST00000478693 TRIP4Q15650 581 aaPredicted RBP11.87□□□□□ -0.51
SRRT-211ENST00000478693 BEND5Q7L4P6 421 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 SIX5Q8N196 739 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 EDAQ92838 391 aa11.87□□□□□ -0.51
SRRT-211ENST00000478693 ASIC4Q96FT7 647 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms