RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 FAM84BQ96KN1 310 aaPredicted RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 LMLNQ96KR4 655 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 ATP6V0A4Q9HBG4 840 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 AGO4Q9HCK5 861 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 A1CFQ9NQ94 594 aaKnown RBP3.92□□□□□ -1.78
HPS3-205ENST00000478525 DECR2Q9NUI1 292 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 SELENONQ9NZV5 590 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 IP6K2Q9UHH9 426 aa3.92□□□□□ -1.78
HPS3-205ENST00000478525 A0A0G2JK05 382 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 A0A1W2PPC1 479 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 MBD3L4A6NDZ8 208 aaPredicted RBP3.91□□□□□ -1.78
HPS3-205ENST00000478525 MBD3L3A6NE82 208 aaPredicted RBP3.91□□□□□ -1.78
HPS3-205ENST00000478525 CA12O43570 354 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 PIAS2O75928 621 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 HOXA7P31268 230 aaPredicted RBP3.91□□□□□ -1.78
HPS3-205ENST00000478525 PGGT1BP53609 377 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 USP49Q70CQ1 688 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 TMEM199Q8N511 208 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 MIB2Q96AX9 1013 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 MEIS3Q99687 375 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 MYLK2Q9H1R3 596 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 SEMA5BQ9P283 1151 aa3.91□□□□□ -1.78
HPS3-205ENST00000478525 NKX1-2Q9UD57 310 aaPredicted RBP3.91□□□□□ -1.78
HPS3-205ENST00000478525 SBNO2Q9Y2G9 1366 aa3.9□□□□□ -1.78
HPS3-205ENST00000478525 C16orf96A6NNT2 1141 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 F8W810 466 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 TBX3O15119 743 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 PHGDHO43175 533 aaKnown RBP3.9□□□□□ -1.79
HPS3-205ENST00000478525 AP1G1O43747 822 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 RPS6KB1P23443 525 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 KLRC1P26715 233 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 NTSR1P30989 418 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 P2RX3P56373 397 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 ST3GAL2Q16842 350 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 CAPRIN2Q6IMN6 1127 aaKnown RBP3.9□□□□□ -1.79
HPS3-205ENST00000478525 B3GNT9Q6UX72 402 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 IL31RAQ8NI17 732 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 MSI2Q96DH6 328 aaKnown RBP3.9□□□□□ -1.79
HPS3-205ENST00000478525 ARHGAP39Q9C0H5 1083 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 ANKRD6Q9Y2G4 727 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 PAXBP1Q9Y5B6 917 aa3.9□□□□□ -1.79
HPS3-205ENST00000478525 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
HPS3-205ENST00000478525 TRBV5-3A0A0A0MS03 114 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 TRIM43BA6NCK2 446 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 PYCARD-AS1I3L0S3 204 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 AKAP10O43572 662 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 RASSF9O75901 435 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 MBPP02686 304 aaPredicted RBP3.89□□□□□ -1.79
HPS3-205ENST00000478525 KRT10P13645 584 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 CD19P15391 556 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 SLC7A1P30825 629 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 GALNSP34059 522 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 NEK2P51955 445 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 JAK3P52333 1124 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 WDR5P61964 334 aaKnown RBP3.89□□□□□ -1.79
HPS3-205ENST00000478525 STK3Q13188 491 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 ARHGEF7Q14155 803 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 BRDTQ58F21 947 aaPredicted RBP3.89□□□□□ -1.79
HPS3-205ENST00000478525 NUGGCQ68CJ6 796 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 FBXL14Q8N1E6 418 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 FAM71DQ8N9W8 422 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 SLC44A5Q8NCS7 719 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 BCAS4Q8TDM0 211 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 PIGKQ92643 395 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 ATP2A3Q93084 1043 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 TRIM43Q96BQ3 446 aaPredicted RBP3.89□□□□□ -1.79
HPS3-205ENST00000478525 HOOK2Q96ED9 719 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 VPS50Q96JG6 964 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 TUBB6Q9BUF5 446 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 VPS45Q9NRW7 570 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 STEAP1Q9UHE8 339 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 SPATA31A1Q5TZJ5 1347 aa3.89□□□□□ -1.79
HPS3-205ENST00000478525 SPTLC2O15270 562 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 ATG13O75143 517 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 HOXA11P31270 313 aaPredicted RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 POLD2P49005 469 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 AGFG1P52594 562 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 SLC12A2P55011 1212 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 EIF4A1P60842 406 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 CCDC15Q0P6D6 951 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 MTA1Q13330 715 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 PTGR1Q14914 329 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 GRHL2Q6ISB3 625 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 RBM44Q6ZP01 1051 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 NR2C2APQ86WQ0 139 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 NR4A3Q92570 626 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 NEUROG1Q92886 237 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 PRR11Q96HE9 360 aaPredicted RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 ACO2Q99798 780 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 STK31Q9BXU1 1019 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 MOV10Q9HCE1 1003 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 PAPOLBQ9NRJ5 636 aaKnown RBP3.88□□□□□ -1.79
HPS3-205ENST00000478525 AASDHPPTQ9NRN7 309 aa3.88□□□□□ -1.79
HPS3-205ENST00000478525 SLC27A6Q9Y2P4 619 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms