RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 PDIA2Q13087 525 aaKnown RBP6.31□□□□□ -1.4
SH3D19-207ENST00000478503 ANKRD22Q5VYY1 191 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 JADE1Q6IE81 842 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 FAM71DQ8N9W8 422 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 ACTL9Q8TC94 416 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
SH3D19-207ENST00000478503 LENG1Q96BZ8 264 aaPredicted RBP6.31□□□□□ -1.4
SH3D19-207ENST00000478503 NIF3L1Q9GZT8 377 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 MIS12Q9H081 205 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 KIAA1586Q9HCI6 787 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 COX16Q9P0S2 106 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
SH3D19-207ENST00000478503 PDE4DIPQ5VU43 2346 aa6.31□□□□□ -1.4
SH3D19-207ENST00000478503 RBBP6Q7Z6E9 1792 aaKnown RBP6.31□□□□□ -1.4
SH3D19-207ENST00000478503 TCRBV7S3A2A0A539 114 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TMEM191CA6NGB0 347 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ZBTB42B2RXF5 422 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 OGTO15294 1046 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 AVILO75366 819 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 KCNH1O95259 989 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HOXC6P09630 235 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 STX2P32856 288 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ADCYAP1R1P41586 468 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 MAGEA4P43358 317 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 MMP13P45452 471 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PHKA2P46019 1235 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 OAZ1P54368 228 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ARPC4P59998 168 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 USP4Q13107 963 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TARBP2Q15633 366 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CNGA2Q16280 664 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CYP1B1Q16678 543 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CCDC142Q17RM4 750 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 BBS9Q3SYG4 887 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PLEKHG4Q58EX7 1191 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PLEKHA7Q6IQ23 1121 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 FAM26EQ8N5C1 309 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TMEM35BQ8NCS4 154 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 AFG1LQ8WV93 481 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RBM18Q96H35 190 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SLITRK1Q96PX8 696 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 MMP19Q99542 508 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TRIM56Q9BRZ2 755 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CDT1Q9H211 546 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SLCO1B3Q9NPD5 702 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 LAMP5Q9UJQ1 280 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 AGAP1Q9UPQ3 857 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HEY1Q9Y5J3 304 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ADGRA2Q96PE1 1338 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 A0A1W2PPM1 405 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SSC5DA1L4H1 1573 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PPEF2O14830 753 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ZNF646O15015 1829 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 AHCYL1O43865 530 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HSPA4LO95757 839 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CD4P01730 458 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TNNC2P02585 160 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 STAG3L1P0CL83 205 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RAC2P15153 192 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ITIH2P19823 946 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PSMA3P25788 255 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HOXD10P28358 340 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 GCKP35557 465 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RABGGTBP53611 331 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 DRG2P55039 364 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 OTUD4Q01804 1114 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 KLF1Q13351 362 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 HABP4Q5JVS0 413 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 FAM102AQ5T9C2 384 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SPOCD1Q6ZMY3 1216 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RFX6Q8HWS3 928 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ARFGAP1Q8N6T3 406 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 C1orf127Q8N9H9 656 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 EIF1ADQ8N9N8 165 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CCDC197Q8NCU1 140 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 GTF3C2Q8WUA4 911 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CASP10Q92851 521 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 OPTNQ96CV9 577 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 C12orf42Q96LP6 360 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RPF1Q9H9Y2 349 aaKnown RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 CACNG4Q9UBN1 327 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 PNMA3Q9UL41 463 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 STK38LQ9Y2H1 464 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 H0YCG3 227 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 DNTTP04053 509 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ERBB2P04626 1255 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 TBXAS1P24557 533 aaPredicted RBP6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ASPAP45381 313 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 RPS6KA3P51812 740 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 DNAJC3Q13217 504 aa6.3□□□□□ -1.4
SH3D19-207ENST00000478503 ANKDD1AQ495B1 522 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms