RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 HESX1Q9UBX0 185 aa8.72□□□□□ -1.01
ERCC8-205ENST00000477893 SLC8A2Q9UPR5 921 aa8.72□□□□□ -1.01
ERCC8-205ENST00000477893 SCML2Q9UQR0 700 aa8.72□□□□□ -1.01
ERCC8-205ENST00000477893 FRYLO94915 3013 aa8.72□□□□□ -1.01
ERCC8-205ENST00000477893 CFAP54Q96N23 3096 aa8.71□□□□□ -1.01
ERCC8-205ENST00000477893 E2F8A0AVK6 867 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 FAM92AA1XBS5 289 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 NEDD8-MDP1E9PL57 170 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 K7ESF4 209 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 M0QYV0 167 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 CCDC192P0DO97 292 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 LCP1P13796 627 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TCF3P15923 654 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TBXAS1P24557 533 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 ATP5C1P36542 298 aaKnown RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 OPRD1P41143 372 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TUBP50607 506 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TKTL1P51854 596 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 KIF11P52732 1056 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 NRLP54845 237 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 APBA1Q02410 837 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 PDE4CQ08493 712 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GOLGA8FQ08AF8 430 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GOLGA8DPQ0D2H9 430 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 ADIGQ0VDE8 80 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 MESP2Q0VG99 397 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GAB4Q2WGN9 574 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GJB7Q6PEY0 223 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RHBDF2Q6PJF5 856 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TPGS1Q6ZTW0 290 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 CEP68Q76N32 757 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RSRC2Q7L4I2 434 aaKnown RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 TRIM59Q8IWR1 403 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 SIX6OS1Q8N1H7 587 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 CCDC33Q8N5R6 958 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RBBP8NLQ8NC74 664 aaPredicted RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 ZBTB44Q8NCP5 570 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 EXOC4Q96A65 974 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 ULBP1Q9BZM6 244 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 NUP62CLQ9H1M0 184 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 LRRC4Q9HBW1 653 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 COMMD8Q9NX08 183 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 IL37Q9NZH6 218 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RWDD2AQ9UIY3 292 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 LSM7Q9UK45 103 aaKnown RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RAB23Q9ULC3 237 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 COQ4Q9Y3A0 265 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 MYH10P35580 1976 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GPR179Q6PRD1 2367 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 GVINP1Q7Z2Y8 2422 aa8.71□□□□□ -1.02
ERCC8-205ENST00000477893 RIF1Q5UIP0 2472 aaKnown RBP8.71□□□□□ -1.02
ERCC8-205ENST00000477893 FAM170AA1A519 330 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 RNF225M0QZC1 329 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 O00370 1275 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 PES1O00541 588 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TRIM24O15164 1050 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ATG13O75143 517 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 FGFR1OPO95684 399 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 GNA14O95837 355 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 RALAP11233 206 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 VDRP11473 427 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 USP8P40818 1118 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 MTIF2P46199 727 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 BCAT1P54687 386 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 MCCD1P59942 119 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 YWHAGP61981 247 aaKnown RBP eCLIP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 BST2Q10589 180 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SIM2Q14190 667 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SNX30Q5VWJ9 437 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 BTBD8Q5XKL5 378 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ARHGAP17Q68EM7 881 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 LONP2Q86WA8 852 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TMEM25Q86YD3 366 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ADGRG2Q8IZP9 1017 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SYNPOQ8N3V7 929 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 UBR7Q8N806 425 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TRIML1Q8N9V2 468 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 ANKRD52Q8NB46 1076 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SUMF1Q8NBK3 374 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TFAP2BQ92481 460 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 EDEM1Q92611 657 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 RUBCNQ92622 972 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SECISBP2LQ93073 1101 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 PNKPQ96T60 521 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
ERCC8-205ENST00000477893 TPSD1Q9BZJ3 242 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 EPC1Q9H2F5 836 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SEMA4AQ9H3S1 761 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 CYLDQ9NQC7 956 aa8.7□□□□□ -1.02
ERCC8-205ENST00000477893 SPHK2Q9NRA0 654 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms