RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 GPRIN1Q7Z2K8 1008 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 FAM35AQ86V20 835 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 NUP93Q8N1F7 819 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 GPD1LQ8N335 351 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 DNASE2BQ8WZ79 361 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 SMOQ99835 787 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 PANK2Q9BZ23 570 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 XYLT2Q9H1B5 865 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
COL4A5-204ENST00000477429 TBC1D14Q9P2M4 693 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 HMGXB4Q9UGU5 601 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 CLEC4EQ9ULY5 219 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 GOLGA4Q13439 2230 aaKnown RBP10.35□□□□□ -0.75
COL4A5-204ENST00000477429 ATMQ13315 3056 aa10.35□□□□□ -0.75
COL4A5-204ENST00000477429 FLNCQ14315 2725 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 A0A1B0GVT2 93 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 FAM92AA1XBS5 289 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 CACNG3O60359 315 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 TACC1O75410 805 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 LDHAP00338 332 aaKnown RBP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 NCAM1P13591 858 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 TYRP14679 529 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 IDEP14735 1019 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 DPP6P42658 865 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 PPP3CCP48454 512 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 KCNC4Q03721 635 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 HNRNPDQ14103 355 aaKnown RBP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 HLA-BQ31612 363 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 WDR72Q3MJ13 1102 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 HECTD3Q5T447 861 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SNX30Q5VWJ9 437 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 HTR3DQ70Z44 454 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 DDX42Q86XP3 938 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 CACUL1Q86Y37 369 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SYCP3Q8IZU3 236 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 B3GALNT2Q8NCR0 500 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SETD7Q8WTS6 366 aaKnown RBP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SORCS1Q8WY21 1168 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 ANKRD36BP1Q96IX9 119 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 CEP295NLQ96MC4 621 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SLITRK1Q96PX8 696 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 GPR174Q9BXC1 333 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 MIR1-1HGQ9H1L0 117 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SNX25Q9H3E2 840 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 GAREM1Q9H706 876 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 NMUR1Q9HB89 426 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 OLFML3Q9NRN5 406 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 USP36Q9P275 1121 aaKnown RBP10.34□□□□□ -0.75
COL4A5-204ENST00000477429 EXOC7Q9UPT5 735 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 SH3BP1Q9Y3L3 701 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 STON1Q9Y6Q2 735 aa10.34□□□□□ -0.75
COL4A5-204ENST00000477429 NUMA1Q14980 2115 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 CBX4O00257 560 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 TGFB1I1O43294 461 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 ZNF217O75362 1048 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 KLKB1P03952 638 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 DLATP10515 647 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 CCDC130P13994 396 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 GAP43P17677 238 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 CD6P30203 668 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 ABCD1P33897 745 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 IL12RB1P42701 662 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 CASP4P49662 377 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 CSNK1EP49674 416 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 COPAP53621 1224 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 RIPPLY3P57055 190 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 GEN1Q17RS7 908 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 DCAF12L1Q5VU92 463 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 Q6ZNB5 142 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 FUKQ8N0W3 1084 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 RBBP8NLQ8NC74 664 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 BBS2Q9BXC9 721 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 ELOVL4Q9GZR5 314 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 ITM2CQ9NQX7 267 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 TM7SF3Q9NS93 570 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 PANK4Q9NVE7 773 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 MARK1Q9P0L2 795 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 KIAA1522Q9P206 1035 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 DKK4Q9UBT3 224 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 SEL1LQ9UBV2 794 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 EIF2B4Q9UI10 523 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 FBXO10Q9UK96 956 aa10.33□□□□□ -0.76
COL4A5-204ENST00000477429 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 APOBEC2Q9Y235 224 aaKnown RBP10.33□□□□□ -0.76
COL4A5-204ENST00000477429 COL6A6A6NMZ7 2263 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms