RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 PNKPQ96T60 521 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 SYNPO2LQ9H987 977 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 NRBP1Q9UHY1 535 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 KCNE5Q9UJ90 142 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 AGTPBP1Q9UPW5 1226 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 DAAM1Q9Y4D1 1078 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 AFG3L2Q9Y4W6 797 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 MRFAP1Q9Y605 127 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 SCINQ9Y6U3 715 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
RPL39-203ENST00000477403 VSTM5A8MXK1 200 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA12O60330 932 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 ENTPD3O75355 529 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 TCEA3O75764 348 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 MAN1A1P33908 653 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 WASP42768 502 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 HTR3AP46098 478 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 CACNB3P54284 484 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 CTXN1P60606 82 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 KRT85P78386 507 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 SCAPQ12770 1279 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 TARDBPQ13148 414 aaKnown RBP eCLIP4.37□□□□□ -1.71
RPL39-203ENST00000477403 WDR43Q15061 677 aaKnown RBP eCLIP4.37□□□□□ -1.71
RPL39-203ENST00000477403 CYP2A13Q16696 494 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 ERCC6LQ2NKX8 1250 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 CXorf57Q6NSI4 855 aaKnown RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 GADL1Q6ZQY3 521 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 ANKRD13CQ8N6S4 541 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 NLGN4YQ8NFZ3 816 aaPredicted RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 PJA1Q8NG27 643 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 NUP133Q8WUM0 1156 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 HDAC10Q969S8 669 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 NACC2Q96BF6 587 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 BOD1Q96IK1 185 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 SARGQ9BW04 601 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 INO80BQ9C086 356 aaPredicted RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 HSFX1Q9UBD0 423 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA6Q9Y5G7 932 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 LRRFIP2Q9Y608 721 aaKnown RBP4.37□□□□□ -1.71
RPL39-203ENST00000477403 NCOR1O75376 2440 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 PFASO15067 1338 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 TNKSO95271 1327 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 KIF16BQ96L93 1317 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 LAMB1P07942 1786 aa4.37□□□□□ -1.71
RPL39-203ENST00000477403 SPTBN5Q9NRC6 3674 aaKnown RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 GRM6O15303 877 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 HAUS5O94927 633 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 ESRRBO95718 433 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 SBK3P0C264 359 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 FAM163BP0C2L3 166 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 FCER1AP12319 257 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 FOSL2P15408 326 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 TYRP1P17643 537 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 SERPINB3P29508 390 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 MAPK4P31152 587 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 MPLP40238 635 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 TRAPPC10P48553 1259 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 CDC42EP1Q00587 391 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 SLFN5Q08AF3 891 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 TCP10Q12799 353 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 CHAF1AQ13111 956 aaPredicted RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 IL10RAQ13651 578 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 PCBP2Q15366 365 aaKnown RBP eCLIP4.36□□□□□ -1.71
RPL39-203ENST00000477403 LRRC26Q2I0M4 334 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 CDC42EP5Q6NZY7 148 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 TSPYL6Q8N831 410 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 SOCS4Q8WXH5 440 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 PTCD3Q96EY7 689 aaKnown RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 TEKT5Q96M29 485 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 STRBPQ96SI9 672 aaKnown RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 PAGR1Q9BTK6 254 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 C1QTNF1Q9BXJ1 281 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 IDI2Q9BXS1 227 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 TMEM74BQ9NUR3 256 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 MORF4L1Q9UBU8 362 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 LIMCH1Q9UPQ0 1083 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 SPEF1Q9Y4P9 236 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 KAT6AQ92794 2004 aa4.36□□□□□ -1.71
RPL39-203ENST00000477403 COL2A1P02458 1487 aaPredicted RBP4.36□□□□□ -1.71
RPL39-203ENST00000477403 CCDC154A6NI56 674 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 GRM8O00222 908 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 DNM1LO00429 736 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 APAF1O14727 1248 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 HTRA2O43464 458 aaPredicted RBP4.35□□□□□ -1.71
RPL39-203ENST00000477403 AGFG2O95081 481 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 ZFPL1O95159 310 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 PDE8BO95263 885 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 MYL3P08590 195 aa4.35□□□□□ -1.71
RPL39-203ENST00000477403 IFIT1P09914 478 aaKnown RBP4.35□□□□□ -1.71
RPL39-203ENST00000477403 NBPF7P0C2Y1 421 aaPredicted RBP4.35□□□□□ -1.71
RPL39-203ENST00000477403 MTHFD1P11586 935 aaKnown RBP4.35□□□□□ -1.71
RPL39-203ENST00000477403 ZKSCAN1P17029 563 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms