RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PRPF6O94906 941 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PRAMEF12O95522 483 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ALBP02768 609 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 TGM1P22735 817 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 MAP2K3P46734 347 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SNRPFP62306 86 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 DUOXA2Q1HG44 320 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SYT13Q7L8C5 426 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SCN4BQ8IWT1 228 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ADGRF2Q8IZF7 708 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PDCL2Q8N4E4 241 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 TTC9BQ8N6N2 239 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 USP13Q92995 863 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ZC3H10Q96K80 434 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ARRDC1-AS1Q9H2J1 176 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 TRPM5Q9NZQ8 1165 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SOX13Q9UN79 622 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ATP8B3O60423 1300 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 OBSL1O75147 1896 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 SPAG17Q6Q759 2223 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 HDCP19113 662 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 DNAJA1P31689 397 aaKnown RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 GRIK1P39086 918 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 GALK1P51570 392 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 TNK2Q07912 1038 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 HSF5Q4G112 596 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 DAB2IPQ5VWQ8 1189 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 TXNDC8Q6A555 127 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 Q6ZS52 159 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 STKLD1Q8NE28 680 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 SPATA17Q96L03 361 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 FNBP1Q96RU3 617 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 FIZ1Q96SL8 496 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 CLEC4MQ9H2X3 399 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 SNX25Q9H3E2 840 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 ECT2Q9H8V3 914 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 CGNQ9P2M7 1197 aaKnown RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 ANGPTL2Q9UKU9 493 aa7.74□□□□□ -1.17
BRCA1-214ENST00000477152 MORC2Q9Y6X9 1032 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-214ENST00000477152 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RGS9O75916 674 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 EPXP11678 715 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 HMGA1P17096 107 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 GJA4P35212 333 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RAP1GAPP47736 663 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 PCDH1Q08174 1060 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 ST3GAL2Q16842 350 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TDRD10Q5VZ19 366 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 FSTL4Q6MZW2 842 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 FBXL19Q6PCT2 694 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CRELD2Q6UXH1 353 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 LRRTM3Q86VH5 581 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 WDR49Q8IV35 697 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 EFCAB13Q8IY85 973 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 PDZD8Q8NEN9 1154 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TSTD1Q8NFU3 115 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 HPDLQ96IR7 371 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 EPSTI1Q96J88 318 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF396Q96N95 335 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TMEM74Q96NL1 305 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 SLITRK1Q96PX8 696 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 MMS19Q96T76 1030 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TNMDQ9H2S6 317 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 MAGEF1Q9HAY2 307 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TBC1D7Q9P0N9 293 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TBC1D14Q9P2M4 693 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 EBF1Q9UH73 591 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 GTF3C4Q9UKN8 822 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CFAP54Q96N23 3096 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CACNA1AO00555 2505 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 HELZP42694 1942 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 UBE4BO95155 1302 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 EIF3DO15371 548 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CLSTN1O94985 981 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CYP2F1P24903 491 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 GBP1P32455 592 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RDXP35241 583 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 MPLP40238 635 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 LIG3P49916 1009 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 DGKEP52429 567 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TNNC1P63316 161 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 MRPS21P82921 87 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 CYP27A1Q02318 531 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TRPC3Q13507 836 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 DMC1Q14565 340 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 STK38Q15208 465 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 E2F5Q15329 346 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 DDR2Q16832 855 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RNF43Q68DV7 783 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 DENND5BQ6ZUT9 1274 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 TRMT11Q7Z4G4 463 aaKnown RBP7.73□□□□□ -1.17
BRCA1-214ENST00000477152 GALNT6Q8NCL4 622 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 PHC3Q8NDX5 983 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RPLP0P6Q8NHW5 317 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 SAAL1Q96ER3 474 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 LRRC3BQ96PB8 259 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 SYT15Q9BQS2 421 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 RSRP1Q9BUV0 290 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms