RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 PTPN20Q4JDL3 420 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 RHBDF2Q6PJF5 856 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 Q6ZS52 159 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 SUGP1Q8IWZ8 645 aaKnown RBP13.04□□□□□ -0.32
APTX-220ENST00000476858 ADGRG2Q8IZP9 1017 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 SIX6OS1Q8N1H7 587 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 EPS8L1Q8TE68 723 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 FAM3CQ92520 227 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
APTX-220ENST00000476858 PCDHB18PQ96TA0 734 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
APTX-220ENST00000476858 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
APTX-220ENST00000476858 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 GRAP2O75791 330 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PFKLP17858 780 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PTMSP20962 102 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 SOX5P35711 763 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 OPRD1P41143 372 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PSEN1P49768 467 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 CLCN5P51795 746 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 FANCCQ00597 558 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PTK2Q05397 1052 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 NR1I3Q14994 352 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 STILQ15468 1287 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 FSTL4Q6MZW2 842 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
APTX-220ENST00000476858 Q6ZNB5 142 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 DNAAF5Q86Y56 855 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 MAML2Q8IZL2 1156 aaPredicted RBP13.03□□□□□ -0.32
APTX-220ENST00000476858 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 BAP1Q92560 729 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 NACA2Q9H009 215 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 CNGB3Q9NQW8 809 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 MYOFQ9NZM1 2061 aa13.03□□□□□ -0.32
APTX-220ENST00000476858 TRDMT1O14717 391 aaKnown RBP13.02□□□□□ -0.33
APTX-220ENST00000476858 AP5Z1O43299 807 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 MED7O43513 233 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 EGFP01133 1207 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 LTFP02788 710 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
APTX-220ENST00000476858 CHRNB1P11230 501 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 PBX1P40424 430 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 GALK1P51570 392 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 SLC8A3P57103 927 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 FMO1Q01740 532 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 ARID5AQ03989 594 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 DHCR24Q15392 516 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 LRSAM1Q6UWE0 723 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 FMNL3Q8IVF7 1028 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 SCML4Q8N228 414 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 DTWD2Q8NBA8 298 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 NEK11Q8NG66 645 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 CPA5Q8WXQ8 436 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 MYEOVQ96EZ4 313 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 FAM81BQ96LP2 452 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 TTYH3Q9C0H2 523 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 LMAN1LQ9HAT1 526 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 ZDHHC4Q9NPG8 344 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 MARCH2Q9P0N8 246 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
APTX-220ENST00000476858 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 E2F8A0AVK6 867 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 H0Y858 1186 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 GJB6O95452 261 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 TPM2P07951 284 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 RALAP11233 206 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 TFE3P19532 575 aaPredicted RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 RFX1P22670 979 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 KRT9P35527 623 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 PDE6CP51160 858 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 RAB6CQ53S08 254 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 OTUD1Q5VV17 481 aaPredicted RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 TRNP1Q6NT89 227 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 KLHDC10Q6PID8 442 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 HTR3DQ70Z44 454 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 ZNF276Q8N554 614 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 NAT16Q8N8M0 369 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms