RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 WDR49Q8IV35 697 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 B3GALNT2Q8NCR0 500 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 CADM4Q8NFZ8 388 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 C1orf216Q8TAB5 229 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 CDC6Q99741 560 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 GPR174Q9BXC1 333 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 MKRN2Q9H000 416 aaKnown RBP12.04□□□□□ -0.48
BRCA1-213ENST00000476777 MIR1-1HGQ9H1L0 117 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 ITM2CQ9NQX7 267 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 WDR35Q9P2L0 1181 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 PCDHGB2Q9Y5G2 931 aa12.04□□□□□ -0.48
BRCA1-213ENST00000476777 FAM149AA5PLN7 773 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 METTL12A8MUP2 240 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 A8MXQ7 604 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 KCNJ18B7U540 433 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 FLRT2O43155 660 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 TBX18O95935 607 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 C19orf57Q0VDD7 668 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
BRCA1-213ENST00000476777 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 FUT11Q495W5 492 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 DCAF12L1Q5VU92 463 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 TPGS1Q6ZTW0 290 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 PAQR9Q6ZVX9 377 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 SV2BQ7L1I2 683 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 GALNT15Q8N3T1 639 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 RHBDD1Q8TEB9 315 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 UBL7Q96S82 380 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-213ENST00000476777 KLF16Q9BXK1 252 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-213ENST00000476777 NACA2Q9H009 215 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 STON1Q9Y6Q2 735 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 MYH10P35580 1976 aa12.03□□□□□ -0.48
BRCA1-213ENST00000476777 GOLGA8CPA6NN73 597 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 TLR5O60602 858 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 C1QL1O75973 258 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 IDEP14735 1019 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 GJB2P29033 226 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 DGKGP49619 791 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 TPMTP51580 245 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 TNNC1P63316 161 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 STARD3Q14849 445 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 SMAD1Q15797 465 aaKnown RBP12.02□□□□□ -0.49
BRCA1-213ENST00000476777 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
BRCA1-213ENST00000476777 P2RY11Q96G91 374 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 DMAP1Q9NPF5 467 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-213ENST00000476777 COMMD8Q9NX08 183 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 FBXO10Q9UK96 956 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 CKAP5Q14008 2032 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 PIEZO2Q9H5I5 2752 aa12.02□□□□□ -0.49
BRCA1-213ENST00000476777 ARID1BQ8NFD5 2236 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 A0A1B0GVT2 93 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 TK2O00142 265 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 OXTRP30559 389 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 CSNK1EP49674 416 aaKnown RBP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 ENPP2Q13822 863 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 PTPRNQ16849 979 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 KIF19Q2TAC6 998 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 TMPRSS6Q8IU80 811 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 BHMTQ93088 406 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 SMARCD1Q96GM5 515 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 XYLT2Q9H1B5 865 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 THAP10Q9P2Z0 257 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 EIF2B4Q9UI10 523 aaKnown RBP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.01□□□□□ -0.49
BRCA1-213ENST00000476777 SLCO1B1Q9Y6L6 691 aa12.01□□□□□ -0.49
BRCA1-213ENST00000476777 NPC1O15118 1278 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 TNFSF14O43557 240 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 TNNI1P19237 187 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 ACO1P21399 889 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 HOXD13P35453 343 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 IL12RB1P42701 662 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 ABCG1P45844 678 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 ZNF132P52740 706 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 MYL6P60660 151 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 SUZ12Q15022 739 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
BRCA1-213ENST00000476777 Q6ZNB5 142 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 FUKQ8N0W3 1084 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 PIP4K2CQ8TBX8 421 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 ZNF516Q92618 1163 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 SIPA1Q96FS4 1042 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 MED10Q9BTT4 135 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 NUP58Q9BVL2 599 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 SMYD3Q9H7B4 428 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 KIAA1586Q9HCI6 787 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 CYLDQ9NQC7 956 aa12□□□□□ -0.49
BRCA1-213ENST00000476777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12□□□□□ -0.497e-6■■■■■ 74.5
BRCA1-213ENST00000476777 KRT82Q9NSB4 513 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms