RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TNNI1P19237 187 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 STARD3Q14849 445 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 MED10Q9BTT4 135 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 KIAA1586Q9HCI6 787 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 BTBD3Q9Y2F9 522 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 PCDHGB2Q9Y5G2 931 aa17.39■□□□□ 0.37
APOBEC3F-203ENST00000476513 PRB1P04280 392 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 HOXD13P35453 343 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 MYL6P60660 151 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 GALNT15Q8N3T1 639 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 BHMTQ93088 406 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 CGRRF1Q99675 332 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 XYLT2Q9H1B5 865 aa17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 EIF2B4Q9UI10 523 aaKnown RBP17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 FBXO2Q9UK22 296 aaPredicted RBP17.38■□□□□ 0.37
APOBEC3F-203ENST00000476513 FAM149AA5PLN7 773 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 AP1G2O75843 785 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 STAU1O95793 577 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 TPMTP51580 245 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 PSMD6Q15008 389 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 SNRNP35Q16560 246 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 ZMIZ2Q8NF64 920 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 C1orf216Q8TAB5 229 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 HPS3Q969F9 1004 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 CCDC127Q96BQ5 260 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 P2RY11Q96G91 374 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 SMARCD1Q96GM5 515 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 UBL7Q96S82 380 aaPredicted RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 SMOQ99835 787 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 SMYD3Q9H7B4 428 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 TLR8Q9NR97 1041 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 KRT82Q9NSB4 513 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 PLK2Q9NYY3 685 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 LSM7Q9UK45 103 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 FBXO10Q9UK96 956 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 SRPRBQ9Y5M8 271 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 GOLGA4Q13439 2230 aaKnown RBP17.37■□□□□ 0.37
APOBEC3F-203ENST00000476513 A0A1B0GVT2 93 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 BEST1O76090 585 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 IGLV3-19P01714 112 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 OXTRP30559 389 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 ATICP31939 592 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 ATP5C1P36542 298 aaKnown RBP17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 TXLNAP40222 546 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 IL12RB1P42701 662 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 CDH8P55286 799 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 CYP24A1Q07973 514 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 C19orf57Q0VDD7 668 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 TRPC3Q13507 836 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 ENPP2Q13822 863 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 STXBP4Q6ZWJ1 553 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 TMPRSS6Q8IU80 811 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 CCDC65Q8IXS2 484 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 FUKQ8N0W3 1084 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 PDCD7Q8N8D1 485 aaKnown RBP17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 ZNF516Q92618 1163 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 SIPA1Q96FS4 1042 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 CYLDQ9NQC7 956 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 OSER1Q9NX31 292 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 THAP10Q9P2Z0 257 aaPredicted RBP17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 KNL1Q8NG31 2342 aa17.36■□□□□ 0.37
APOBEC3F-203ENST00000476513 A0A087X0B3 334 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 ACO1P21399 889 aaKnown RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 STAT6P42226 847 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 CSNK1EP49674 416 aaKnown RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 ZNF132P52740 706 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 GOLGA8FQ08AF8 430 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 GOLGA8DPQ0D2H9 430 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SUZ12Q15022 739 aaKnown RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SMAD1Q15797 465 aaKnown RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 Q6ZNB5 142 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 CCDC73Q6ZRK6 1079 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 PRCCQ92733 491 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SYAP1Q96A49 352 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 TNIP3Q96KP6 325 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 NUP58Q9BVL2 599 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 PANK2Q9BZ23 570 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 FBXO44Q9H4M3 255 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SMC3Q9UQE7 1217 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SLC27A6Q9Y2P4 619 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 SLCO1B1Q9Y6L6 691 aa17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 ASH1LQ9NR48 2969 aaKnown RBP17.35■□□□□ 0.37
APOBEC3F-203ENST00000476513 NPC1O15118 1278 aa17.34■□□□□ 0.37
APOBEC3F-203ENST00000476513 MDM4O15151 490 aa17.34■□□□□ 0.37
APOBEC3F-203ENST00000476513 TNFSF14O43557 240 aa17.34■□□□□ 0.37
APOBEC3F-203ENST00000476513 C1QL1O75973 258 aa17.34■□□□□ 0.37
APOBEC3F-203ENST00000476513 CCDC130P13994 396 aa17.34■□□□□ 0.37
APOBEC3F-203ENST00000476513 ABCG1P45844 678 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms