RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 BARX2Q9UMQ3 279 aaPredicted RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 GMEB1Q9Y692 573 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CCDC195A0A1B0GUA6 201 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 DLDP09622 509 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 TGFB2P61812 414 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 COG7P83436 770 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 CBLBQ13191 982 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 MED21Q13503 144 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 SYCP2LQ5T4T6 812 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 FYB2Q5VWT5 728 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 IYDQ6PHW0 289 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ATG4CQ96DT6 458 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PRICKLE1Q96MT3 831 aaPredicted RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 XYLT2Q9H1B5 865 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ARMC7Q9H6L4 198 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 MAFBQ9Y5Q3 323 aaPredicted RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 DNAH12Q6ZR08 3092 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 IGKV6D-21A0A0A0MT36 114 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 H3BSA7 217 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ASPAP45381 313 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 EPHB1P54762 984 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PDIA2Q13087 525 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 TLR1Q15399 786 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 KBTBD12Q3ZCT8 623 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 MMEL1Q495T6 779 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 LRRC38Q5VT99 294 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 UGT2A3Q6UWM9 527 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 UNC45BQ8IWX7 931 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 RCOR2Q8IZ40 523 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 SLC26A7Q8TE54 656 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 OLFM3Q96PB7 478 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 BRD8Q9H0E9 1235 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ANGPTL2Q9UKU9 493 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 SSC5DA1L4H1 1573 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 LRCH4O75427 683 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 DGAT1O75907 488 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ASS1P00966 412 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 NR3C2P08235 984 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ACTR3P61158 418 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ACTR2P61160 394 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 CDK16Q00536 496 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 TARBP2Q15633 366 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 CYP4A22Q5TCH4 519 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 CCDC62Q6P9F0 684 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ANKRD13BQ86YJ7 626 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 RDM1Q8NG50 284 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 MTBPQ96DY7 904 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 OXNAD1Q96HP4 312 aaPredicted RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 PEBP4Q96S96 227 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 CGRRF1Q99675 332 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 TARS2Q9BW92 718 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 TSSK1BQ9BXA7 367 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PORCNQ9H237 461 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 ZNF277Q9NRM2 450 aaPredicted RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 PARVAQ9NVD7 372 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 FBXO40Q9UH90 709 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 AGO2Q9UKV8 859 aaKnown RBP8.69□□□□□ -1.02
VAPB-205ENST00000476395 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PLA2G4CQ9UP65 541 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 SH3GLB1Q9Y371 365 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 PCDHB4Q9Y5E5 795 aa8.69□□□□□ -1.02
VAPB-205ENST00000476395 HMX2A2RU54 273 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 PEX10O60683 326 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 ZWINTO95229 277 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 ASNSP08243 561 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 TROVE2P10155 538 aaKnown RBP eCLIP8.68□□□□□ -1.02
VAPB-205ENST00000476395 RFC1P35251 1148 aaPredicted RBP8.68□□□□□ -1.02
VAPB-205ENST00000476395 RPL22P35268 128 aaKnown RBP8.68□□□□□ -1.02
VAPB-205ENST00000476395 ALDH18A1P54886 795 aaKnown RBP8.68□□□□□ -1.02
VAPB-205ENST00000476395 ASPHQ12797 758 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 EMC2Q15006 297 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 DLGAP5Q15398 846 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 PTPN20Q4JDL3 420 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 TFDP3Q5H9I0 405 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 GDPD5Q8WTR4 605 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
VAPB-205ENST00000476395 TMIGD2Q96BF3 282 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 GPRASP2Q96D09 838 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 FOXP3Q9BZS1 431 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 SLC7A5P2Q9GIP4 190 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 C20orf27Q9GZN8 174 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 R3HDMLQ9H3Y0 253 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 MANSC1Q9H8J5 431 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 PCDH9Q9HC56 1237 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 FETUBQ9UGM5 382 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 RPL26L1Q9UNX3 145 aaKnown RBP8.68□□□□□ -1.02
VAPB-205ENST00000476395 SHOC2Q9UQ13 582 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 PRR5-ARHGAP8B1AHC4 643 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 ZBTB42B2RXF5 422 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 SPATA31C2B4DYI2 1134 aa8.68□□□□□ -1.02
VAPB-205ENST00000476395 CD1EP15812 388 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms