RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 DDX39AO00148 427 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 MAGEC1O60732 1142 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 CALCAP01258 141 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 FESP07332 822 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 PSAPP07602 524 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 NR3C2P08235 984 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SUPT20HL2P0C7V6 817 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 ZSCAN5DPP0CG00 497 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 PRKCHP24723 683 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 ITGB8P26012 769 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 GNA15P30679 374 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 RPL22P35268 128 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 CETN2P41208 172 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 CDK7P50613 346 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SH3BP2P78314 561 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 NOP14P78316 857 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 MRPS35P82673 323 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 PPARDQ03181 441 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 KCNJ11Q14654 390 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TTLL4Q14679 1199 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SETDB1Q15047 1291 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TMED2Q15363 201 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TRIP13Q15645 432 aaPredicted RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 KLHL38Q2WGJ6 581 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 WDR44Q5JSH3 913 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 STXBP5Q5T5C0 1151 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD22Q5VYY1 191 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TXNRD3NBQ6F5E7 133 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TAPT1Q6NXT6 567 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TIFABQ6ZNK6 161 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SEPT14Q6ZU15 432 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 CYP4V2Q6ZWL3 525 aaPredicted RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 MAEAQ7L5Y9 396 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 NLRP9Q7RTR0 991 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 APBB1IPQ7Z5R6 666 aaPredicted RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 ANKMY2Q8IV38 441 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 CCDC60Q8IWA6 550 aaPredicted RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 ATP11CQ8NB49 1132 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 OR5B17Q8NGF7 314 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 GDAP1Q8TB36 358 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 RAB3IL1Q8TBN0 382 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 ZFAND2BQ8WV99 257 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 GATA6Q92908 595 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 PTPRN2Q92932 1015 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 TBC1D31Q96DN5 1066 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 MCRS1Q96EZ8 462 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 FAM161BQ96MY7 647 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 C7orf26Q96N11 449 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SMC6Q96SB8 1091 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 RMDN3Q96TC7 470 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 C11orf70Q9BRQ4 267 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 FAM213AQ9BRX8 229 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 BTBD10Q9BSF8 475 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 CCDC28BQ9BUN5 200 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 C1QTNF2Q9BXJ5 285 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 HEMGNQ9BXL5 484 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 KIF9Q9HAQ2 790 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 PTPRHQ9HD43 1115 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 PDGFCQ9NRA1 345 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 SIRPGQ9P1W8 387 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 STX18Q9P2W9 335 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 GABBR1Q9UBS5 961 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 GGT7Q9UJ14 662 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 STRIP2Q9ULQ0 834 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 NOD1Q9Y239 953 aa7.15□□□□□ -1.26
UBR4-212ENST00000475973 MTO1Q9Y2Z2 717 aaKnown RBP7.15□□□□□ -1.26
UBR4-212ENST00000475973 DOCK3Q8IZD9 2030 aa7.15□□□□□ -1.27
UBR4-212ENST00000475973 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 F8VP50 259 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 APOC4-APOC2K7ER74 178 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 HNRNPDLO14979 420 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 B4GALT4O60513 344 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 KPNA6O60684 536 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CCDC22O60826 627 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 SNNO75324 88 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 LRCH4O75427 683 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 TMEM63AO94886 807 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 GSRP00390 522 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CST3P01034 146 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 APOC2P02655 101 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 MYL3P08590 195 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 GSTA2P09210 222 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 LCTP09848 1927 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 KRT10P13645 584 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 KRT5P13647 590 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 ETS1P14921 441 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CD58P19256 250 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 EIF2AK2P19525 551 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 PAX7P23759 505 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 KDELR1P24390 212 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 EDNRBP24530 442 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 MARK3P27448 753 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 IL1R2P27930 398 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CCND2P30279 289 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 STIP1P31948 543 aaKnown RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 GBP2P32456 591 aaPredicted RBP7.14□□□□□ -1.27
UBR4-212ENST00000475973 PCK1P35558 622 aa7.14□□□□□ -1.27
UBR4-212ENST00000475973 CDK16Q00536 496 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms