RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 KBTBD4Q9NVX7 518 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 APOBEC2Q9Y235 224 aaKnown RBP21.61■■□□□ 1.05
VPS36-203ENST00000475375 GPSM3Q9Y4H4 160 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 UBE4BO95155 1302 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 FAM92AA1XBS5 289 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 WASH3PC4AMC7 463 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 EXOC3O60645 756 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 SYT1P21579 422 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 SNRPFP62306 86 aaKnown RBP21.6■■□□□ 1.05
VPS36-203ENST00000475375 ORC1Q13415 861 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 STK38Q15208 465 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 SLC2A14Q8TDB8 520 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 SETD7Q8WTS6 366 aaKnown RBP21.6■■□□□ 1.05
VPS36-203ENST00000475375 JAKMIP2Q96AA8 810 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 ZDHHC5Q9C0B5 715 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 PLK2Q9NYY3 685 aa21.6■■□□□ 1.05
VPS36-203ENST00000475375 LOC400499M0QZD8 3231 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 GFRA2O00451 464 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 GREM1O60565 184 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 BEST1O76090 585 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 NCOA4Q13772 614 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 ZCCHC9Q8N567 271 aaKnown RBP21.59■■□□□ 1.05
VPS36-203ENST00000475375 ZMIZ2Q8NF64 920 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 TOE1Q96GM8 510 aaKnown RBP21.59■■□□□ 1.05
VPS36-203ENST00000475375 GZF1Q9H116 711 aaPredicted RBP21.59■■□□□ 1.05
VPS36-203ENST00000475375 SDCBP2Q9H190 292 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 CUEDC2Q9H467 287 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 VRTNQ9H8Y1 702 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 PRDM16Q9HAZ2 1276 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 FAM49BQ9NUQ9 324 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 MARK1Q9P0L2 795 aa21.59■■□□□ 1.05
VPS36-203ENST00000475375 A0A1B0GTW7 788 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 CYP26A1O43174 497 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 CAPNS1P04632 268 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 P4HA1P13674 534 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 ADORA2BP29275 332 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 COL28A1Q2UY09 1125 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 CCNI2Q6ZMN8 369 aaPredicted RBP21.58■■□□□ 1.05
VPS36-203ENST00000475375 PDZD3Q86UT5 571 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 GPR174Q9BXC1 333 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 STON1Q9Y6Q2 735 aa21.58■■□□□ 1.05
VPS36-203ENST00000475375 MORC2Q9Y6X9 1032 aaPredicted RBP21.58■■□□□ 1.05
VPS36-203ENST00000475375 MDM4O15151 490 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 NCAM1P13591 858 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 NDST1P52848 882 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 CUL4AQ13619 759 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 E2F4Q16254 413 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 FUT11Q495W5 492 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 C10orf120Q5SQS8 335 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 IQUBQ8NA54 791 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 MDM1Q8TC05 714 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 CYLDQ9NQC7 956 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 NUDT5Q9UKK9 219 aa21.57■■□□□ 1.04
VPS36-203ENST00000475375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 LRRIQ3A6PVS8 624 aaPredicted RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 CISD3P0C7P0 127 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 FAM200BP0CF97 657 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 TRIM21P19474 475 aaKnown RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 AP3M2P53677 418 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 GPRIN1Q7Z2K8 1008 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 C12orf29Q8N999 325 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 PLEKHO2Q8TD55 490 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 GAREM1Q9H706 876 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 CSNK1G1Q9HCP0 422 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 SLC39A2Q9NP94 309 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 OSER1Q9NX31 292 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 WSB2Q9NYS7 404 aaPredicted RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 CGNQ9P2M7 1197 aaKnown RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 TFIP11Q9UBB9 837 aaKnown RBP21.56■■□□□ 1.04
VPS36-203ENST00000475375 HMGXB4Q9UGU5 601 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 DNMT3LQ9UJW3 386 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 PCOLCE2Q9UKZ9 415 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 SCML2Q9UQR0 700 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 ADAMTS20P59510 1910 aa21.56■■□□□ 1.04
VPS36-203ENST00000475375 A0A1W2PQH9 124 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 SYNCRIPO60506 623 aaKnown RBP21.55■■□□□ 1.04
VPS36-203ENST00000475375 RARGP13631 454 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 ACO1P21399 889 aaKnown RBP21.55■■□□□ 1.04
VPS36-203ENST00000475375 PLA2G4AP47712 749 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 UNC13DQ70J99 1090 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 SLCO6A1Q86UG4 719 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 C12orf56Q8IXR9 622 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 DNASE2BQ8WZ79 361 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 C7orf25Q9BPX7 421 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 MKRN2Q9H000 416 aaKnown RBP21.55■■□□□ 1.04
VPS36-203ENST00000475375 BLZF1Q9H2G9 400 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 IL21RQ9HBE5 538 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 CELSR3Q9NYQ7 3312 aa21.55■■□□□ 1.04
VPS36-203ENST00000475375 SPTLC2O15270 562 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 CER1O95813 267 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 ACADMP11310 421 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 CASP1P29466 404 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 MATKP42679 507 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 NASPP49321 788 aaPredicted RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 KNOP1Q1ED39 458 aaKnown RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 BMT2Q1RMZ1 405 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 DCAF12L1Q5VU92 463 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 CNNM4Q6P4Q7 775 aa21.54■■□□□ 1.04
VPS36-203ENST00000475375 METTL3Q86U44 580 aaKnown RBP21.54■■□□□ 1.04
VPS36-203ENST00000475375 CACUL1Q86Y37 369 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms