RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SH3BGRLO75368 114 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 AKAP3O75969 853 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CRTAMO95727 393 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 RRM2P31350 389 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 LHX1P48742 406 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 ANKS6Q68DC2 871 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CES3Q6UWW8 571 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CYP2W1Q8TAV3 490 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TRPC4APQ8TEL6 797 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 SH3BP4Q9P0V3 963 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 H0YC42 278 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 KLRC2P26717 231 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 AQP5P55064 265 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 MROH8Q9H579 483 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TLR8Q9NR97 1041 aaKnown RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 SMAPO00193 183 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TIMM44O43615 452 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 ZCCHC18P0CG32 403 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 DSG3P32926 999 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 GUCA1AP43080 201 aaPredicted RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 HERC6Q8IVU3 1022 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 F8VZ95 297 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 PYGMP11217 842 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TXNRD3Q86VQ6 643 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 GLMNQ92990 594 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CCDC3Q9BQI4 270 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 IGFLR1Q9H665 355 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 MIEF1Q9NQG6 463 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 EGFRP00533 1210 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 OR1E1P30953 314 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 NDST1P52848 882 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 TRAF2Q12933 501 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 MMRN1Q13201 1228 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 ILDR2Q71H61 639 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.6
VAPB-204ENST00000475243 TRAPPC12Q8WVT3 735 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 CGRRF1Q99675 332 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 CNPY3Q9BT09 278 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 CDC42EP4Q9H3Q1 356 aaKnown RBP11.27□□□□□ -0.6
VAPB-204ENST00000475243 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.6
VAPB-204ENST00000475243 INTS13Q9NVM9 706 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 WHRNQ9P202 907 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 BAIAP3O94812 1187 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 BGNP21810 368 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 DSG1Q02413 1049 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 BMPR2Q13873 1038 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 MTFMTQ96DP5 389 aaKnown RBP11.27□□□□□ -0.6
VAPB-204ENST00000475243 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.6
VAPB-204ENST00000475243 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.6
VAPB-204ENST00000475243 CCNT2O60583 730 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 RPL10AP62906 217 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 CHRNB3Q05901 458 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 NFIL3Q16649 462 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 ERMARDQ5T6L9 678 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SUGP1Q8IWZ8 645 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 RMND5AQ9H871 391 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 NBNO60934 754 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 LTFP02788 710 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 INSRRP14616 1297 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CCDC126Q96EE4 140 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 DEPDC7Q96QD5 511 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 PAFAH2Q99487 392 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SPATA31A5Q5VU36 1347 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SPATA31A7Q8IWB4 1347 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 MICAL2O94851 1124 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 NR6A1Q15406 480 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 AGKQ53H12 422 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 PPP1R10Q96QC0 940 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 ROGDIQ9GZN7 287 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SPATC1LQ9H0A9 340 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 GEMIN8Q9NWZ8 242 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 CD163L1Q9NR16 1453 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 FEN1P39748 380 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 HERVK_113P62684 666 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 MPP3Q13368 585 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 BFSP2Q13515 415 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 ATP6AP1LQ52LC2 224 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SPOCD1Q6ZMY3 1216 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms