RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PLEKHO2Q8TD55 490 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 CAMK1GQ96NX5 476 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 C7orf25Q9BPX7 421 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 IL37Q9NZH6 218 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 STARD13Q9Y3M8 1113 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 PCDHB9Q9Y5E1 797 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 PLXNA2O75051 1894 aa14.78□□□□□ -0.04
CCDC78-209ENST00000474647 A0A1W2PQD8 194 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 FAM92AA1XBS5 289 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 MEI4A8MW99 385 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 MDM4O15151 490 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 POLR2DO15514 142 aaKnown RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 PPP6R2O75170 966 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 P4HA1P13674 534 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 CD59P13987 128 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 ATP5C1P36542 298 aaKnown RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 AFMP43652 599 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 NDST1P52848 882 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 KNOP1Q1ED39 458 aaKnown RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 ZNF423Q2M1K9 1284 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 SYCP2LQ5T4T6 812 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 SHC4Q6S5L8 630 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 HTR3DQ70Z44 454 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 GPRIN1Q7Z2K8 1008 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 C12orf56Q8IXR9 622 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 GABRG3Q99928 467 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 DUSP9Q99956 384 aaKnown RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 KLF16Q9BXK1 252 aaPredicted RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 VRTNQ9H8Y1 702 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 PLK2Q9NYY3 685 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 WDR35Q9P2L0 1181 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
CCDC78-209ENST00000474647 NUDT5Q9UKK9 219 aa14.77□□□□□ -0.05
CCDC78-209ENST00000474647 MUC22E2RYF6 1773 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 SH3BP5O60239 455 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 CUTAO60888 179 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 VNN1O95497 513 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 FAM200BP0CF97 657 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 GNSP15586 552 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 MAOBP27338 520 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 AP3M2P53677 418 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 EHHADHQ08426 723 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 TRIP6Q15654 476 aaKnown RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 BMT2Q1RMZ1 405 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 FOXD4L5Q5VV16 416 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 PARD3BQ8TEW8 1205 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 FOXD4L4Q8WXT5 416 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 SNX21Q969T3 373 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 MRGPRX1Q96LB2 322 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 ZNF396Q96N95 335 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 FAM124BQ9H5Z6 455 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 MAGEF1Q9HAY2 307 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 DNAAF2Q9NVR5 837 aaKnown RBP14.76□□□□□ -0.05
CCDC78-209ENST00000474647 OSER1Q9NX31 292 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 SUSD2Q9UGT4 822 aa14.76□□□□□ -0.05
CCDC78-209ENST00000474647 CELSR3Q9NYQ7 3312 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 WASH3PC4AMC7 463 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 GREM1O60565 184 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 C4BPAP04003 597 aaKnown RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 TRIM21P19474 475 aaKnown RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 ACO1P21399 889 aaKnown RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 PIK3CAP42336 1068 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 DLG4P78352 724 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 GRIK2Q13002 908 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 CUL4BQ13620 913 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 HNRNPDQ14103 355 aaKnown RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 STARD3Q14849 445 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 SGSM1Q2NKQ1 1148 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 WDR45BQ5MNZ6 344 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 C10orf120Q5SQS8 335 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 SPOPLQ6IQ16 392 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 RAB44Q7Z6P3 723 aaPredicted RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 CACUL1Q86Y37 369 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 NAXDQ8IW45 347 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 GRAMD1CQ8IYS0 662 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 GOLGA5Q8TBA6 731 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
CCDC78-209ENST00000474647 CSNK1G1Q9HCP0 422 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 CD248Q9HCU0 757 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 MARK1Q9P0L2 795 aa14.75□□□□□ -0.05
CCDC78-209ENST00000474647 A0A1W2PQH9 124 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 KIF20AO95235 890 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 YEATS4O95619 227 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 FTH1P19P0C7X4 201 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 RARGP13631 454 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 CD6P30203 668 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 ASPAP45381 313 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 ACAP1Q15027 740 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 CLEC20AQ6ZU45 233 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 ZCCHC9Q8N567 271 aaKnown RBP14.74□□□□□ -0.05
CCDC78-209ENST00000474647 PNPLA1Q8N8W4 532 aa14.74□□□□□ -0.05
CCDC78-209ENST00000474647 FOXJ1Q92949 421 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms