RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PAFAH1B1P43034 410 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 RWDD2BP57060 319 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 NME3Q13232 169 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 ATAT1Q5SQI0 421 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 KLHDC10Q6PID8 442 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 SLFN11Q7Z7L1 901 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 UNC45BQ8IWX7 931 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 CMASQ8NFW8 434 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 ATRIPQ8WXE1 791 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 SMG7Q92540 1137 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 NDRG1Q92597 394 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 PBKQ96KB5 322 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 WDR24Q96S15 920 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 TBCBQ99426 244 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 NAP1L3Q99457 506 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 DDX50Q9BQ39 737 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 MAK16Q9BXY0 300 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 IRX2Q9BZI1 471 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 PRDM12Q9H4Q4 367 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 TRPC7Q9HCX4 862 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 STIM2Q9P246 746 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 USP18Q9UMW8 372 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 NAALADL1Q9UQQ1 740 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 HBS1LQ9Y450 684 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 CAPN6Q9Y6Q1 641 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 BRCA2P51587 3418 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SYNJ2BP-COX16A0A087WUM0 186 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 TRAV19A0A0A6YYK7 116 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 GABBR2O75899 941 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ZRANB2O95218 330 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 GJB6O95452 261 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 FTCDO95954 541 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 PRLRP16471 622 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 HMGA1P17096 107 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 HDCP19113 662 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 HARS2P49590 506 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ZNF135P52742 658 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 USP46P62068 366 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ITIH3Q06033 890 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 EFEMP1Q12805 493 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 NNTQ13423 1086 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 KRT81Q14533 505 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 TAF5Q15542 800 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 CCDC14Q49A88 953 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 TCEAL5Q5H9L2 206 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 EFHC2Q5JST6 749 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 BRMS1LQ5PSV4 323 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SEL1L2Q5TEA6 688 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 MEI1Q5TIA1 1274 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 NUGGCQ68CJ6 796 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 MSANTD2Q6P1R3 559 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 TMEM184AQ6ZMB5 413 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 POLNQ7Z5Q5 900 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ADGRD2Q7Z7M1 963 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 NT5DC3Q86UY8 548 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 DDX42Q86XP3 938 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 PSTKQ8IV42 348 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 ATP6V0D2Q8N8Y2 350 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 LRRC57Q8N9N7 239 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 KCTD6Q8NC69 237 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 MAIP1Q8WWC4 291 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 PGAP3Q96FM1 320 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 RBM41Q96IZ5 413 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 BTBD6Q96KE9 485 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 RIPOR3Q96MK2 946 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 NPY6RQ99463 290 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SMOC2Q9H3U7 446 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SLITRK6Q9H5Y7 841 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 DONSONQ9NYP3 566 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 COX16Q9P0S2 106 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 RNF14Q9UBS8 474 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 RASAL2Q9UJF2 1139 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SALL4Q9UJQ4 1053 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 LSM7Q9UK45 103 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 MRPS23Q9Y3D9 190 aaKnown RBP10.78□□□□□ -0.68
COL12A1-206ENST00000474564 HYOU1Q9Y4L1 999 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SAR1BQ9Y6B6 198 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
COL12A1-206ENST00000474564 SLC12A8A0AV02 714 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 EPOPA6NHQ4 379 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 KCNK3O14649 394 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 CKMP06732 381 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 ZDHHC11BP0C7U3 371 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 POU3F3P20264 500 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-206ENST00000474564 CTNNA2P26232 953 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 MIPP30301 263 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 GJC1P36383 396 aa10.77□□□□□ -0.69
COL12A1-206ENST00000474564 AVPR1AP37288 418 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms