RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SLC9A1P19634 815 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 HLA-DPA1P20036 260 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CMA1P23946 247 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CTNNB1P35222 781 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PCGF2P35227 344 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC15A1P46059 708 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 NKX2-5P52952 324 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 ATP12AP54707 1039 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PSMC5P62195 406 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 HTRA3P83110 453 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TNFAIP2Q03169 654 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PLCL1Q15111 1095 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 INAVAQ3KP66 663 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC9B1Q4ZJI4 515 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 AARS2Q5JTZ9 985 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 SAPCD1Q5SSQ6 148 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CACHD1Q5VU97 1274 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 FOXB2Q5VYV0 432 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF425Q6IV72 752 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 C4orf22Q6V702 233 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CDH24Q86UP0 819 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF227Q86WZ6 799 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SULF2Q8IWU5 870 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CPSF7Q8N684 471 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 IGSF22Q8N9C0 903 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TMIEQ8NEW7 156 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC35G2Q8TBE7 412 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PTCD2Q8WV60 388 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 NCSTNQ92542 709 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 AZIN2Q96A70 460 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ITPKCQ96DU7 683 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 IFT43Q96FT9 208 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MS4A4AQ96JQ5 239 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MYRFLQ96LU7 910 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TMEM120AQ9BXJ8 343 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TIMMDC1Q9NPL8 285 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC35D1Q9NTN3 355 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 EVA1BQ9NVM1 165 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ASH2LQ9UBL3 628 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CTNNAL1Q9UBT7 734 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 DCDC2Q9UHG0 476 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 FOXD3Q9UJU5 478 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 SMG5Q9UPR3 1016 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 UHRF1BP1LA0JNW5 1464 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RAB19A4D1S5 217 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF879B4DU55 563 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PDE2AO00408 941 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 AP5Z1O43299 807 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SOAT2O75908 522 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 HEXIM1O94992 359 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 IL6P05231 212 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MYBL1P10243 752 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GAAP10253 952 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 COX5BP10606 129 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PRKCAP17252 672 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TCN1P20061 433 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 AHCYP23526 432 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PTGER2P43116 358 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MSH2P43246 934 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ACADVLP49748 655 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC26A2P50443 739 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PMP22Q01453 160 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CACNB1Q02641 598 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 LMAN2Q12907 356 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TTMPQ5BVD1 217 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 KCTD16Q68DU8 428 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SNRNP48Q6IEG0 339 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 MRM1Q6IN84 353 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 STXBP4Q6ZWJ1 553 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 USP43Q70EL4 1123 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PHLDB2Q86SQ0 1253 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SNX31Q8N9S9 440 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 DNAJC1Q96KC8 554 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC29A1Q99808 456 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 NUP58Q9BVL2 599 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 EHD4Q9H223 541 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 HSD3B7Q9H2F3 369 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 NDST4Q9H3R1 872 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC35C2Q9NQQ7 365 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF275Q9NSD4 429 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 ORC3Q9UBD5 711 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 TNFRSF10DQ9UBN6 386 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 AURKCQ9UQB9 309 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 DTNAQ9Y4J8 743 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SPEF1Q9Y4P9 236 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 A0A0U1RQJ8 604 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TMEM120BA0PK00 339 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SMCO2A6NFE2 343 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GOLGA8KD6RF30 607 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 F5H0A9 414 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 H0YCG3 227 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 HCRTR2O43614 444 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 BUB1O43683 1085 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NOL3O60936 208 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 H2AFYO75367 372 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 GPC4O75487 556 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CRTAPO75718 401 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 GCNT3O95395 438 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 ALDH1A1P00352 501 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms