RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SF3A2Q15428 464 aaKnown RBP21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 CBWD6Q4V339 395 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 CBWD3Q5JTY5 395 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 CBWD5Q5RIA9 395 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 EMC10Q5UCC4 262 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 IL31Q6EBC2 164 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 GRAMD4Q6IC98 578 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 TMEM92Q6UXU6 159 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 TTC30AQ86WT1 665 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 ANKRD52Q8NB46 1076 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 TATDN2Q93075 761 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 DHTKD1Q96HY7 919 aaPredicted RBP21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 SPACA7Q96KW9 195 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 ARID3AQ99856 593 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 NUP205Q92621 2012 aa21.41■■□□□ 1.02
PDLIM4-206ENST00000474421 NEDD8-MDP1E9PL57 170 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 CACNG3O60359 315 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 TYRP14679 529 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 COG7P83436 770 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 CREB5Q02930 508 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 CUL2Q13617 745 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 CCDC6Q16204 474 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 C10orf76Q5T2E6 689 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 PMS2CLQ68D20 193 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 SCD5Q86SK9 330 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 ZNF513Q8N8E2 541 aaPredicted RBP21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 OLIG1Q8TAK6 271 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 DNAJC17Q9NVM6 304 aaKnown RBP21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 BCCIPQ9P287 314 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 STARD13Q9Y3M8 1113 aa21.4■■□□□ 1.02
PDLIM4-206ENST00000474421 BCLAF3A2AJT9 711 aaKnown RBP21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 ANTXRLA6NF34 631 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 ADAM23O75077 832 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 CAVIN2O95810 425 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 TBXAS1P24557 533 aaPredicted RBP21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 PMS1P54277 932 aaKnown RBP21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 PIGZQ86VD9 579 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 SLC35C1Q96A29 364 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 CEP63Q96MT8 703 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 DCLK3Q9C098 648 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 NUDT5Q9UKK9 219 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 KIAA1257Q9ULG3 409 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 INVSQ9Y283 1065 aa21.39■■□□□ 1.01
PDLIM4-206ENST00000474421 TRIM49BA6NDI0 452 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 MDM4O15151 490 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 ZBTB24O43167 697 aaPredicted RBP21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 STC2O76061 302 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 HNRNPLP14866 589 aaKnown RBP eCLIP21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 BCAT1P54687 386 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 SGO2Q562F6 1265 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 RAB41Q5JT25 222 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 SDE2Q6IQ49 451 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 Q6ZNB5 142 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 TPGS1Q6ZTW0 290 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 MIB1Q86YT6 1006 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 ERCC4Q92889 916 aaPredicted RBP21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 HESX1Q9UBX0 185 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 STRIP2Q9ULQ0 834 aa21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 CNOT1A5YKK6 2376 aaKnown RBP21.38■■□□□ 1.01
PDLIM4-206ENST00000474421 PLXND1Q9Y4D7 1925 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 TCRBV21S2A2A0A5A6 115 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 NTSR1P30989 418 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 CHKAP35790 457 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 CETN1Q12798 172 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 PPM1JQ5JR12 505 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 STPG1Q5TH74 334 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 RSRC2Q7L4I2 434 aaKnown RBP21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 PGBD3Q8N328 593 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 HMGB4Q8WW32 186 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 RASAL2Q9UJF2 1139 aa21.37■■□□□ 1.01
PDLIM4-206ENST00000474421 LAMA1P25391 3075 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 XPO1O14980 1071 aaKnown RBP21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 PMM2O15305 246 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 MAP3K13O43283 966 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 ZBED1O96006 694 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 P2RY2P41231 377 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 DGKGP49619 791 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 TKTL1P51854 596 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 YWHAGP61981 247 aaKnown RBP eCLIP21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 EFEMP1Q12805 493 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 GOLGA7BQ2TAP0 167 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 SPDYCQ5MJ68 293 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 PM20D1Q6GTS8 502 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 FOXR2Q6PJQ5 311 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 LPCAT2Q7L5N7 544 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 CYP2U1Q7Z449 544 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 LRRC4Q9HBW1 653 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 MARCH2Q9P0N8 246 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 MAN1B1Q9UKM7 699 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 TSPAN16Q9UKR8 245 aa21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 CIZ1Q9ULV3 898 aaPredicted RBP21.36■■□□□ 1.01
PDLIM4-206ENST00000474421 BICDL2A1A5D9 508 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 VDRP11473 427 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 HOXB2P14652 356 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 CD19P15391 556 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 BCKDHBP21953 392 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 FMO5P49326 533 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 BST2Q10589 180 aaKnown RBP21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 CCDC40Q4G0X9 1142 aa21.35■■□□□ 1.01
PDLIM4-206ENST00000474421 RNF43Q68DV7 783 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms