RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
VAMP4-203ENST00000474047 UCHL3P15374 230 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 ZNF165P49910 485 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 CCR3P51677 355 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 MEA1Q16626 185 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 FSTL4Q6MZW2 842 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 SCUBE3Q8IX30 993 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 SPEM1Q8N4L4 309 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 STK32AQ8WU08 396 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 WBP2Q969T9 261 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 FAM149B1Q96BN6 582 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 NOX5Q96PH1 765 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 BPIFA3Q9BQP9 254 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 FAM207AQ9NSI2 230 aaPredicted RBP14.89□□□□□ -0.03
VAMP4-203ENST00000474047 FBXO4Q9UKT5 387 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 SYCE3A1L190 88 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 STC2O76061 302 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 EGFP01133 1207 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 LTFP02788 710 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SP9P0CG40 484 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 PNMA6AP0CW24 399 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-203ENST00000474047 CXCL12P48061 93 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SNX16P57768 344 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 CCINQ13939 588 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SKOR2Q2VWA4 1001 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-203ENST00000474047 FBXO43Q4G163 708 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 ZC3H14Q6PJT7 736 aaKnown RBP14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SLC47A2Q86VL8 602 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 PASD1Q8IV76 773 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 FAM71AQ8IYT1 594 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 CCDC26Q8TAB7 109 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 STK33Q9BYT3 514 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SYNCQ9H7C4 482 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 PLCB1Q9NQ66 1216 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 SPHK2Q9NRA0 654 aa14.88□□□□□ -0.03
VAMP4-203ENST00000474047 LGALS16A8MUM7 142 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 ATG13O75143 517 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 CLCN1P35523 988 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 NCAPHQ15003 741 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 PREPLQ4J6C6 727 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-203ENST00000474047 NAIF1Q69YI7 327 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-203ENST00000474047 Q6ZS52 159 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 TPGS1Q6ZTW0 290 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 FMNL3Q8IVF7 1028 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 NAT16Q8N8M0 369 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 NEK11Q8NG66 645 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 CLEC4CQ8WTT0 213 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 PNKPQ96T60 521 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 TRIM62Q9BVG3 475 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 FBRSL1Q9HCM7 1045 aaKnown RBP14.87□□□□□ -0.03
VAMP4-203ENST00000474047 SFMBT1Q9UHJ3 866 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 CACNA1IQ9P0X4 2223 aa14.87□□□□□ -0.03
VAMP4-203ENST00000474047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 CAPN9O14815 690 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 GABBR2O75899 941 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 APODP05090 189 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 NCAM1P13591 858 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 CORO1AP31146 461 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 KLK7P49862 253 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 TPM4P67936 248 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 SYCP1Q15431 976 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 FILIP1LQ4L180 1135 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 NUDT18Q6ZVK8 323 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 BHLHA9Q7RTU4 235 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 TMEM25Q86YD3 366 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 DENND1CQ8IV53 801 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 PLD4Q96BZ4 506 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 XPO6Q96QU8 1125 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 BBS2Q9BXC9 721 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 SLC4A5Q9BY07 1137 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 NLRC4Q9NPP4 1024 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 WDR35Q9P2L0 1181 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 PCDHGC3Q9UN70 934 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 HBS1LQ9Y450 684 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 E5RJQ4 531 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 NEDD8-MDP1E9PL57 170 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 RNF40O75150 1001 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 ZNF18P17022 549 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 CHKAP35790 457 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 OPRD1P41143 372 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 SLC6A11P48066 632 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 PDCLQ13371 301 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 ZNF528Q3MIS6 628 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 DPY19L2P1Q6NXN4 242 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 TSSK4Q6SA08 328 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 ATRIPQ8WXE1 791 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 NAA15Q9BXJ9 866 aaKnown RBP14.86□□□□□ -0.03
VAMP4-203ENST00000474047 LHX5Q9H2C1 402 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 ARHGEF4Q9NR80 690 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 DEC1Q9P2X7 70 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 DAAM1Q9Y4D1 1078 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
VAMP4-203ENST00000474047 LRRC10BA6NIK2 292 aa14.85□□□□□ -0.03
VAMP4-203ENST00000474047 F8VZ95 297 aa14.85□□□□□ -0.03
VAMP4-203ENST00000474047 CYBBP04839 570 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms