RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PON2Q15165 354 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 MAPRE1Q15691 268 aaKnown RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 TAF12Q16514 161 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 ARHGAP44Q17R89 818 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 ARHGAP29Q52LW3 1261 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 NAIF1Q69YI7 327 aaPredicted RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 PKN3Q6P5Z2 889 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 TMEM270Q6UE05 265 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 SCN4BQ8IWT1 228 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 KIAA2013Q8IYS2 634 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 TTC39CQ8N584 583 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 MYCBPAPQ8TBZ2 947 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 PCED1BQ96HM7 432 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 GCNAQ96QF7 691 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 CYP2S1Q96SQ9 504 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 FAM83CQ9BQN1 747 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 SEMA4AQ9H3S1 761 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 UBE2TQ9NPD8 197 aaPredicted RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 GKN1Q9NS71 199 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 TMEM30AQ9NV96 361 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 OBP2AQ9NY56 170 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 AJAP1Q9UKB5 411 aaPredicted RBP9.66□□□□□ -0.86
SMC4-213ENST00000472282 PCDHB4Q9Y5E5 795 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 VPS13AQ96RL7 3174 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 OTOGLQ3ZCN5 2332 aa9.66□□□□□ -0.86
SMC4-213ENST00000472282 PTPRZ1P23471 2315 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 A0A1B0GTH6 734 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 C2orf78A6NCI8 922 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 LRRC10BA6NIK2 292 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 CLDN5O00501 218 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 TEX33O43247 280 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 CSH1P0DML2 217 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 CSH2P0DML3 217 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 ARSAP15289 507 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 TRIM21P19474 475 aaKnown RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 BDNFP23560 247 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 ADORA2BP29275 332 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 RAD23BP54727 409 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 MFAP3P55082 362 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 MLLT6P55198 1093 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 FANCCQ00597 558 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 SYCP1Q15431 976 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 CFAP221Q4G0U5 840 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 DPY19L2P1Q6NXN4 242 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 ZC3H14Q6PJT7 736 aaKnown RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 MON1AQ86VX9 555 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 RALGPS2Q86X27 583 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 CRYBG2Q8N1P7 616 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 CELF5Q8N6W0 485 aaKnown RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 C12orf29Q8N999 325 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 SLC4A11Q8NBS3 891 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 TRMT2BQ96GJ1 504 aaKnown RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 TMEM176AQ96HP8 235 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 FUBP3Q96I24 572 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMC4-213ENST00000472282 MYRFLQ96LU7 910 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 PCMTD1Q96MG8 357 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 ERGIC2Q96RQ1 377 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 MED10Q9BTT4 135 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 B3GNT5Q9BYG0 378 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 ZNF518BQ9C0D4 1074 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 GANQ9H2C0 597 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 EBF3Q9H4W6 596 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 FAM124BQ9H5Z6 455 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 ABCB6Q9NP58 842 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 ZSCAN32Q9NX65 697 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 DNAJC12Q9UKB3 198 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 FHOD1Q9Y613 1164 aa9.65□□□□□ -0.86
SMC4-213ENST00000472282 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
SMC4-213ENST00000472282 SPAG17Q6Q759 2223 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 ATP8B3O60423 1300 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CDC14CA4D256 554 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 K7ESF4 209 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 EPHB6O15197 1021 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CALCAP01258 141 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 PNMA6AP0CW24 399 aaPredicted RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 KRT5P13647 590 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CD19P15391 556 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 AVPR1AP37288 418 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 MAGEA11P43364 429 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 RPL10AP62906 217 aaKnown RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 ZXDBP98169 803 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 SRSF5Q13243 272 aaKnown RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 RAPGEF1Q13905 1077 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CCINQ13939 588 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 LPAL2Q16609 132 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 ITPRIPL2Q3MIP1 535 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FILIP1LQ4L180 1135 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 KLHDC7AQ5VTJ3 777 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FSTL4Q6MZW2 842 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 PAQR9Q6ZVX9 377 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms