RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	BTBD8	Q5XKL5	378 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NUP93	Q8N1F7	819 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	C8orf48	Q96LL4	319 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	GDAP1L1	Q96MZ0	367 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	MAGEB5	Q9BZ81	275 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	RAB17	Q9H0T7	212 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PCDH18	Q9HCL0	1135 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZNF446	Q9NWS9	450 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SPG21	Q9NZD8	308 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	MTRR	Q9UBK8	725 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NFU1	Q9UMS0	254 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	AP4E1	Q9UPM8	1137 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	USP3	Q9Y6I4	520 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KIAA1671	Q9BY89	1806 aa		11.21	□□□□□ -0.61
MRPS18B-208	ENST00000472267	MDM4	O15151	490 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DAPK3	O43293	454 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	VNN2	O95498	520 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ECEL1	O95672	775 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	EFEMP2	O95967	443 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SOD2	P04179	222 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ARSE	P51690	589 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SMARCB1	Q12824	385 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TAZ	Q16635	292 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SCML4	Q8N228	414 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SPPL2B	Q8TCT7	592 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PIK3R5	Q8WYR1	880 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	NT5C3B	Q969T7	300 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	KCTD15	Q96SI1	283 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CRISPLD1	Q9H336	500 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TMPRSS4	Q9NRS4	437 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PIGV	Q9NUD9	493 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DDIT4	Q9NX09	232 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SAE1	Q9UBE0	346 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FZD10	Q9ULW2	581 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267		A0A1W2PQH9	124 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	WDR27	A2RRH5	827 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	LIAS	O43766	372 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ENDOD1	O94919	500 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HAPLN1	P10915	354 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DNAJB2	P25686	324 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TNFRSF8	P28908	595 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	L1CAM	P32004	1257 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CA8	P35219	290 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GLUD2	P49448	558 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PGF	P49763	221 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	USP46	P62068	366 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ROR1	Q01973	937 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	KRT17	Q04695	432 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TRIP13	Q15645	432 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ANKRD20A8P	Q5CZ79	823 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TMEM240	Q5SV17	173 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	C1orf228	Q6PIY5	440 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BBS12	Q6ZW61	710 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	7e-9	■■■□□ 14.8
MRPS18B-208	ENST00000472267	GSTA5	Q7RTV2	222 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SCD5	Q86SK9	330 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TAC4	Q86UU9	113 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RNF168	Q8IYW5	571 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PYROXD2	Q8N2H3	581 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FIBCD1	Q8N539	461 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ATL2	Q8NHH9	583 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GIPC2	Q8TF65	315 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GRK7	Q8WTQ7	553 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	AUTS2	Q8WXX7	1259 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RNF34	Q969K3	372 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RNF157	Q96PX1	679 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ERP44	Q9BS26	406 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TRIM62	Q9BVG3	475 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HERC2P3	Q9BVR0	1158 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FBXO44	Q9H4M3	255 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	NMUR1	Q9HB89	426 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	AAAS	Q9NRG9	546 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RRN3	Q9NYV6	651 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DNPEP	Q9ULA0	475 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ZNF148	Q9UQR1	794 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	EFR3B	Q9Y2G0	817 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SNX24	Q9Y343	169 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PCDHB12	Q9Y5F1	795 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BACE2	Q9Y5Z0	518 aa		11.2	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GJB5	O95377	273 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	UROD	P06132	367 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	YWHAQ	P27348	245 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RPL10A	P62906	217 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	OTUD4	Q01804	1114 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DSG1	Q02413	1049 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MTMR3	Q13615	1198 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CUL1	Q13616	776 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BYSL	Q13895	437 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TFDP2	Q14188	446 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DPYSL2	Q16555	572 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DUPD1	Q68J44	220 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SLC8B1	Q6J4K2	584 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms