RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PABPC3Q9H361 631 aaKnown RBP4.44□□□□□ -1.7
PTCD3-209ENST00000472044 EPS8L2Q9H6S3 715 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 PACSIN3Q9UKS6 424 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 AMFRQ9UKV5 643 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 NFU1Q9UMS0 254 aa4.44□□□□□ -1.7
PTCD3-209ENST00000472044 H0YIZ8 118 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 FCHO1O14526 889 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 CTIFO43310 598 aaKnown RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 ACTL6BO94805 426 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 FGAP02671 866 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 FAM163BP0C2L3 166 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 C6P13671 934 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 CREB1P16220 341 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 NDUFB7P17568 137 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 ADRA1DP25100 572 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 KLRK1P26718 216 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 CST5P28325 142 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 CYP2C18P33260 490 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 MCM5P33992 734 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 PBX1P40424 430 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 PPM1FP49593 454 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 RENBPP51606 427 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 AP2B1P63010 937 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 E2F1Q01094 437 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 DNASE1L3Q13609 305 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 TMEM196Q5HYL7 178 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 ATPAF1Q5TC12 328 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 DENND2CQ68D51 928 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 SULT6B1Q6IMI4 303 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 GRHL2Q6ISB3 625 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 RINT1Q6NUQ1 792 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 DPY19L3Q6ZPD9 716 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 PIK3AP1Q6ZUJ8 805 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 SFTPA1Q8IWL2 248 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 PNPLA1Q8N8W4 532 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 NGDNQ8NEJ9 315 aaKnown RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 ABHD11Q8NFV4 315 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 TBC1D5Q92609 795 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 SDCCAG3Q96C92 435 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 LENG8Q96PV6 779 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 TTPALQ9BTX7 342 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 MGAT4CQ9UBM8 478 aa4.43□□□□□ -1.7
PTCD3-209ENST00000472044 SRP68Q9UHB9 627 aaKnown RBP4.43□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A18PA6NE21 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A16PA6NEW6 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 LINC00473A8K010 186 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A5PA8MXJ8 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 AP4M1O00189 453 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 RHOBTB3O94955 611 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 GCP02774 474 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 NPSP0C0P6 89 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A15PP0C7V4 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 FAM90A14PP0C7W9 464 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 GYS1P13807 737 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 ITPKBP27987 946 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 ACVRL1P37023 503 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 SOX10P56693 466 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 EFR3AQ14156 821 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 HSP90AB4PQ58FF6 505 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 TMEM63BQ5T3F8 832 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 CCDC144NLQ6NUI1 221 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 NFRKBQ6P4R8 1299 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 DBX2Q6ZNG2 339 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 TRABD2AQ86V40 505 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 ZNF354CQ86Y25 554 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 CCDC117Q8IWD4 279 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-209ENST00000472044 SCAMP5Q8TAC9 235 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 NEU4Q8WWR8 484 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-209ENST00000472044 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 GCC1Q96CN9 775 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 TIMP4Q99727 224 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-209ENST00000472044 MLXIPQ9HAP2 919 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 SAYSD1Q9NPB0 183 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 KCNK9Q9NPC2 374 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
PTCD3-209ENST00000472044 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 ENTPD2Q9Y5L3 495 aa4.42□□□□□ -1.7
PTCD3-209ENST00000472044 LOC105369274A0A096LPK9 316 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 LOC102723532A0A0G2JNH3 316 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 EFCAB8A8MWE9 144 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 CES2O00748 559 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 IRAK2O43187 625 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 ENGP17813 658 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-209ENST00000472044 MMP8P22894 467 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 GSTM5P46439 218 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 DIO1P49895 249 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 CCT8P50990 548 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 EEFSECP57772 596 aaKnown RBP4.41□□□□□ -1.7
PTCD3-209ENST00000472044 PSG6Q00889 435 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 DEUP1Q05D60 604 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 SEMA3BQ13214 749 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 TTC22Q5TAA0 569 aa4.41□□□□□ -1.7
PTCD3-209ENST00000472044 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms