RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NAALADL1Q9UQQ1 740 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 ARID1BQ8NFD5 2236 aaPredicted RBP7.4□□□□□ -1.23
SMC5-202ENST00000471372 TDRD9Q8NDG6 1382 aaKnown RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 PRAMEF33A0A0G2JMD5 474 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 GXYLT2A0PJZ3 443 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SAC3D1A6NKF1 404 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 H3BNC9 293 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 RFXAPO00287 272 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 PRAMEF10O60809 474 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 ERBB2P04626 1255 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 ELANEP08246 267 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 PEPDP12955 493 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 KRT20P35900 424 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 GSTM5P46439 218 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SLURP1P55000 103 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 RNASE9P60153 205 aaKnown RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 RPP30P78346 268 aaKnown RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 SETQ01105 290 aaPredicted RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 FOXL1Q12952 345 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 MTAPQ13126 283 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 TDGQ13569 410 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 DCTN1Q14203 1278 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 ZNF569Q5MCW4 686 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SNX30Q5VWJ9 437 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 ARMC3Q5W041 872 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SLC9A4Q6AI14 798 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SFRP4Q6FHJ7 346 aaPredicted RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 RINLQ6ZS11 566 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 FAM109AQ8N4B1 249 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 LSMEM1Q8N8F7 131 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 ATG4AQ8WYN0 398 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 REXO5Q96IC2 774 aaKnown RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 VN1R3Q9BXE9 311 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 TEX101Q9BY14 249 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 BAG5Q9UL15 447 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
SMC5-202ENST00000471372 NEU2Q9Y3R4 380 aa7.39□□□□□ -1.23
SMC5-202ENST00000471372 SPATA31A3Q5VYP0 1347 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 TCAF2A6NFQ2 919 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 ZAR1LA6NP61 321 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 M0QZQ0 153 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 PEX12O00623 359 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 KIAA0355O15063 1070 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 NOBOXO60393 691 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 PTP4A3O75365 173 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 WDR47O94967 919 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 F9P00740 461 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 THBS4P35443 961 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 RABGGTBP53611 331 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 TIRAPP58753 221 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 NFIL3Q16649 462 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 ZNF385BQ569K4 471 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 FAM69AQ5T7M9 428 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 FOXR2Q6PJQ5 311 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 SYNE4Q8N205 404 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 D2HGDHQ8N465 521 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 NGEFQ8N5V2 710 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 FSIP1Q8NA03 581 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 CREB3L4Q8TEY5 395 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 OSCP1Q8WVF1 389 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 SNX19Q92543 992 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 TMEM125Q96AQ2 219 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 MPHOSPH9Q99550 1183 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 FUZQ9BT04 418 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 CCDC68Q9H2F9 335 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 HAUS2Q9NVX0 235 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 NKIRAS2Q9NYR9 191 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 CAMK2AQ9UQM7 478 aa7.38□□□□□ -1.23
SMC5-202ENST00000471372 A0A1W2PS29 197 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 AGAP5A6NIR3 686 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 SEPT4O43236 478 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 RECQL4O94761 1208 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 URI1O94763 535 aaPredicted RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 HLA-DOAP06340 250 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 PDHA1P08559 390 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 MYCLP12524 364 aaPredicted RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 HOXD13P35453 343 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 MTHFSP49914 203 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 ARF3P61204 181 aaPredicted RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 ARF1P84077 181 aaKnown RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 FPGSQ05932 587 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 TUBB3Q13509 450 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 CLCA4Q14CN2 919 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 TBCEQ15813 527 aaPredicted RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 TBRG1Q3YBR2 411 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 PDCD4Q53EL6 469 aaKnown RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 ANKRD40Q6AI12 368 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 OGFOD2Q6N063 350 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 CCDC144NLQ6NUI1 221 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 MICALCLQ6ZW33 695 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 KRT27Q7Z3Y8 459 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 MAPKAPK5Q8IW41 473 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 IZUMO1Q8IYV9 350 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 ANKRD44Q8N8A2 993 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 SUPT20HQ8NEM7 779 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 EIF3CQ99613 913 aaKnown RBP7.37□□□□□ -1.23
SMC5-202ENST00000471372 VPS28Q9UK41 221 aa7.37□□□□□ -1.23
SMC5-202ENST00000471372 RAB21Q9UL25 225 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms