RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CCDC70Q6NSX1 233 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 CRTC1Q6UUV9 634 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 MAMDC4Q6UXC1 1216 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 SPATA31D4Q6ZUB0 917 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 GALNT15Q8N3T1 639 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 STT3BQ8TCJ2 826 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 FAM89AQ96GI7 184 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 ABHD8Q96I13 439 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 LRIG1Q96JA1 1093 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 NELL2Q99435 816 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 SLC46A2Q9BY10 475 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 GPR87Q9BY21 358 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 PCDHAC1Q9H158 963 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 ZBTB26Q9HCK0 441 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 TBC1D30Q9Y2I9 924 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 CHST2Q9Y4C5 530 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 USP15Q9Y4E8 981 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-204ENST00000471245 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.51□□□□□ -1.37
CKS1B-204ENST00000471245 FLT4P35916 1363 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
CKS1B-204ENST00000471245 ARFGEF2Q9Y6D5 1785 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 KIF24Q5T7B8 1368 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 TRIM24O15164 1050 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 IRAK2O43187 625 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 RPS6KA4O75676 772 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 WDHD1O75717 1129 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 SUN1O94901 812 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 CD53P19397 219 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 CHRM3P20309 590 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ITGALP20701 1170 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 MST1P26927 711 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 PPIFP30405 207 aaKnown RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 APOBEC3AP31941 199 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 MAN2A2P49641 1150 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 CTCFP49711 727 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ANXA11P50995 505 aaKnown RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 DGKEP52429 567 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF134P52741 427 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 LBX1P52954 281 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 POLE2P56282 527 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 OCA2Q04671 838 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 NSUN2Q08J23 767 aaKnown RBP eCLIP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 POSTNQ15063 836 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 TRIM71Q2Q1W2 868 aaKnown RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 FAXCQ5TGI0 409 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 LIN54Q6MZP7 749 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 SGMS1Q86VZ5 419 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 CCDC28AQ8IWP9 274 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 PAF1Q8N7H5 531 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 BPIFB1Q8TDL5 484 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF483Q8TF39 744 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 STYXQ8WUJ0 223 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 TBATAQ96M53 351 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 TESK2Q96S53 571 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 KCNE5Q9UJ90 142 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ZMYND8Q9ULU4 1186 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 COL11A2P13942 1736 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-204ENST00000471245 THSD7BQ9C0I4 1608 aa6.5□□□□□ -1.37
CKS1B-204ENST00000471245 ADAMTSL1Q8N6G6 1762 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 A0A1W2PS29 197 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 PIP5K1BO14986 540 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 FYB1O15117 783 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 FOXD2O60548 495 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 PIAS2O75928 621 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 GPANK1O95872 356 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 NPPBP16860 134 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 ZIK1Q3SY52 487 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 TMTC4Q5T4D3 741 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 CACHD1Q5VU97 1274 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 RAP1GAP2Q684P5 730 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 FOXR2Q6PJQ5 311 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 SLC30A10Q6XR72 485 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 USP49Q70CQ1 688 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 ZNF280BQ86YH2 543 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 Q8NA96 180 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 FAM227BQ96M60 508 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 PTDSS2Q9BVG9 487 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 SORBS1Q9BX66 1292 aaKnown RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 C9orf78Q9NZ63 289 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 SRP68Q9UHB9 627 aaKnown RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 GJD2Q9UKL4 321 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 LRRFIP2Q9Y608 721 aaKnown RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 SCN11AQ9UI33 1791 aa6.49□□□□□ -1.37
CKS1B-204ENST00000471245 USP42Q9H9J4 1324 aaKnown RBP6.49□□□□□ -1.37
CKS1B-204ENST00000471245 TONSLQ96HA7 1378 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 OR2W5A6NFC9 320 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 TOR1BO14657 336 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 ASNA1O43681 348 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 COQ9O75208 318 aa6.48□□□□□ -1.37
CKS1B-204ENST00000471245 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms