RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 PRKRIP1Q9H875 184 aaPredicted RBP7.59□□□□□ -1.19
LDHB-206ENST00000470985 TOMM22Q9NS69 142 aa7.59□□□□□ -1.19
LDHB-206ENST00000470985 TCFL5Q9UL49 500 aa7.59□□□□□ -1.19
LDHB-206ENST00000470985 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.59□□□□□ -1.19
LDHB-206ENST00000470985 CDY1Q9Y6F8 540 aa7.59□□□□□ -1.19
LDHB-206ENST00000470985 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.23e-7■■■□□ 16.8
LDHB-206ENST00000470985 MYO16Q9Y6X6 1858 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 MED13LQ71F56 2210 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 IGKV6D-21A0A0A0MT36 114 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 A0A1W2PQD8 194 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 ARL5CA6NH57 179 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 FLRT2O43155 660 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 TADA2AO75478 443 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 CCNE2O96020 404 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 SLC26A2P50443 739 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 LINC00310P59036 64 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 BNC1Q01954 994 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 TEKQ02763 1124 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 FBXO43Q4G163 708 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 ZNF385BQ569K4 471 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 UBXN11Q5T124 520 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 CYP4A22Q5TCH4 519 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 C1QL3Q5VWW1 255 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 USP17L6PQ6QN14 398 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 DBX2Q6ZNG2 339 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 DHX40Q8IX18 779 aaKnown RBP7.58□□□□□ -1.2
LDHB-206ENST00000470985 CCDC33Q8N5R6 958 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 SAMD3Q8N6K7 520 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 SMARCC2Q8TAQ2 1214 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 MTMR8Q96EF0 704 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 P2RY13Q9BPV8 354 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 ACBD3Q9H3P7 528 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 EBF3Q9H4W6 596 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 GAREM1Q9H706 876 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 ZNF552Q9H707 407 aaPredicted RBP7.58□□□□□ -1.2
LDHB-206ENST00000470985 GPRC5CQ9NQ84 441 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 SIRT5Q9NXA8 310 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 CEP72Q9P209 647 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 CNOT6Q9ULM6 557 aaKnown RBP7.58□□□□□ -1.2
LDHB-206ENST00000470985 MED13Q9UHV7 2174 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 SVILO95425 2214 aa7.58□□□□□ -1.2
LDHB-206ENST00000470985 ESYT2A0FGR8 921 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 WIPF3A6NGB9 483 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ZBTB5O15062 677 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 AP5Z1O43299 807 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ATE1O95260 518 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 SEC24AO95486 1093 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 FGRP09769 529 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 IFIT2P09913 472 aaKnown RBP7.57□□□□□ -1.2
LDHB-206ENST00000470985 ARSAP15289 507 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ATP5JP18859 108 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 SFPQP23246 707 aaKnown RBP eCLIP7.57□□□□□ -1.2
LDHB-206ENST00000470985 ARL4AP40617 200 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 KIR2DL1P43626 348 aaPredicted RBP7.57□□□□□ -1.2
LDHB-206ENST00000470985 KIR2DL2P43627 348 aaPredicted RBP7.57□□□□□ -1.2
LDHB-206ENST00000470985 DLG4P78352 724 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 SPIRE1Q08AE8 756 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 SCRN1Q12765 414 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ITGB3BPQ13352 177 aaPredicted RBP7.57□□□□□ -1.2
LDHB-206ENST00000470985 CRY1Q16526 586 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ASPRV1Q53RT3 343 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 CEP128Q6ZU80 1094 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 PTRH1Q86Y79 214 aaKnown RBP7.57□□□□□ -1.2
LDHB-206ENST00000470985 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 ZNF654Q8IZM8 581 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 TRIML1Q8N9V2 468 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 EXTL1Q92935 676 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 LRRC3Q9BY71 257 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 PLAAQ9Y263 795 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 INSL5Q9Y5Q6 135 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 UBIAD1Q9Y5Z9 338 aa7.57□□□□□ -1.2
LDHB-206ENST00000470985 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.22e-9■■■□□ 15.3
LDHB-206ENST00000470985 A0A087WZ62 844 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 DDX39AO00148 427 aaKnown RBP7.56□□□□□ -1.2
LDHB-206ENST00000470985 CBX4O00257 560 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 PRRG1O14668 218 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
LDHB-206ENST00000470985 KRT1P04264 644 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 PRKCBP05771 671 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 ZNF883P0CG24 379 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 IGFBP6P24592 240 aaPredicted RBP7.56□□□□□ -1.2
LDHB-206ENST00000470985 EPHA5P54756 1037 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 RUNX3Q13761 415 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 HSP90AA2PQ14568 343 aaPredicted RBP7.56□□□□□ -1.2
LDHB-206ENST00000470985 SEZ6Q53EL9 994 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 ADGRF1Q5T601 910 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 CDCP2Q5VXM1 449 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 ABHD15Q6UXT9 468 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 RTL10Q7L3V2 364 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 CATSPER4Q7RTX7 472 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 ERC1Q8IUD2 1116 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 TMEM151BQ8IW70 566 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 SIRT2Q8IXJ6 389 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 REXO1Q8N1G1 1221 aaKnown RBP7.56□□□□□ -1.2
LDHB-206ENST00000470985 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
LDHB-206ENST00000470985 HMGB4Q8WW32 186 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms