RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-218ENST00000470942 THAP12O43422 761 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 MED7O43513 233 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 GREM1O60565 184 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 LILRB5O75023 590 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 STC2O76061 302 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 LETM1O95202 739 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-218ENST00000470942 MBD3O95983 291 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 EIF2DP41214 584 aaKnown RBP16.45■□□□□ 0.22
HDAC6-218ENST00000470942 DMWDQ09019 674 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 C2orf27AQ580R0 203 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 RBM43Q6ZSC3 357 aaKnown RBP16.45■□□□□ 0.22
HDAC6-218ENST00000470942 TPGS1Q6ZTW0 290 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 C12orf40Q86WS4 652 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 RNF139Q8WU17 664 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 EDEM1Q92611 657 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 HINFPQ9BQA5 517 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 CNGB3Q9NQW8 809 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 ARHGEF4Q9NR80 690 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 NFE2L3Q9Y4A8 694 aa16.45■□□□□ 0.22
HDAC6-218ENST00000470942 FAM186AA6NE01 2351 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-218ENST00000470942 YJEFN3A6XGL0 299 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 E7ENQ6 273 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 NEDD8-MDP1E9PL57 170 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 K7EQS6 105 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 KAT7O95251 611 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 GNA15P30679 374 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 HOXC13P31276 330 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 DAOAP59103 153 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 BHLHA9Q7RTU4 235 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 LONP2Q86WA8 852 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ENOX1Q8TC92 643 aaKnown RBP16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ZNF606Q8WXB4 792 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ACDQ96AP0 544 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 HSFY1Q96LI6 401 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 BBS2Q9BXC9 721 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 DCLK3Q9C098 648 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ACP6Q9NPH0 428 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ABCC13Q9NSE7 274 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 OLA1Q9NTK5 396 aaKnown RBP16.44■□□□□ 0.22
HDAC6-218ENST00000470942 POLR3BQ9NW08 1133 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-218ENST00000470942 DNAJC12Q9UKB3 198 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 ZNF510Q9Y2H8 683 aa16.44■□□□□ 0.22
HDAC6-218ENST00000470942 HOXC11O43248 304 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 TULP3O75386 442 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 EEF1GP26641 437 aaKnown RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 CORO1AP31146 461 aaKnown RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 GRIA2P42262 883 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 PXNP49023 591 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 MESP2Q0VG99 397 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 PREPLQ4J6C6 727 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 MIIPQ5JXC2 388 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 Q6ZNB5 142 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 FMNL3Q8IVF7 1028 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 SCML4Q8N228 414 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 SUMF1Q8NBK3 374 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 IRGQQ8WZA9 623 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 GOLGA1Q92805 767 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 XPO6Q96QU8 1125 aaKnown RBP16.43■□□□□ 0.22
HDAC6-218ENST00000470942 MIS12Q9H081 205 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 SIX2Q9NPC8 291 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 WDR35Q9P2L0 1181 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 DEC1Q9P2X7 70 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 SFMBT1Q9UHJ3 866 aa16.43■□□□□ 0.22
HDAC6-218ENST00000470942 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 BECN2A8MW95 431 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 GABBR2O75899 941 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 FBXO21O94952 628 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 KLKB1P03952 638 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 TYRP14679 529 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 GPD2P43304 727 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 DMC1Q14565 340 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 PRR23BQ6ZRT6 265 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 NUDT18Q6ZVK8 323 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 SYT13Q7L8C5 426 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 DENND1CQ8IV53 801 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 SFTPA1Q8IWL2 248 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 ETFBKMTQ8IXQ9 262 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 CCDC33Q8N5R6 958 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 USP33Q8TEY7 942 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 CLEC4CQ8WTT0 213 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 SHC3Q92529 594 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 BHMTQ93088 406 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 PLD4Q96BZ4 506 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 HHIPQ96QV1 700 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 DNAJC17Q9NVM6 304 aaKnown RBP16.42■□□□□ 0.22
HDAC6-218ENST00000470942 TAB2Q9NYJ8 693 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-218ENST00000470942 RAB23Q9ULC3 237 aa16.42■□□□□ 0.22
HDAC6-218ENST00000470942 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms