RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 B3GALNT2Q8NCR0 500 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 JAKMIP2Q96AA8 810 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 CEP295NLQ96MC4 621 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 UBL7Q96S82 380 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 GABRG3Q99928 467 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 PANK2Q9BZ23 570 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 WSB2Q9NYS7 404 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 KIAA1522Q9P206 1035 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-204ENST00000470191 SEL1LQ9UBV2 794 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 STARD13Q9Y3M8 1113 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 STON1Q9Y6Q2 735 aa9.66□□□□□ -0.86
CCDC171-204ENST00000470191 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.86
CCDC171-204ENST00000470191 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 MDM4O15151 490 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 FLRT2O43155 660 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 CACNG3O60359 315 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 TLR5O60602 858 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 C1QL1O75973 258 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 ACADMP11310 421 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 TNNI1P19237 187 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SLC5A3P53794 718 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 CDH8P55286 799 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 ORC1Q13415 861 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 STARD3Q14849 445 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.86
CCDC171-204ENST00000470191 RRAGBQ5VZM2 374 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 LAYNQ6UX15 382 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SCARA5Q6ZMJ2 495 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SCUBE3Q8IX30 993 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 BAHD1Q8TBE0 780 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-204ENST00000470191 DNASE2BQ8WZ79 361 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 HPS3Q969F9 1004 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SIPA1Q96FS4 1042 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 CDC6Q99741 560 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 MKRN2Q9H000 416 aaKnown RBP9.65□□□□□ -0.86
CCDC171-204ENST00000470191 PANK4Q9NVE7 773 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
CCDC171-204ENST00000470191 NUDT5Q9UKK9 219 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 SLCO1B1Q9Y6L6 691 aa9.65□□□□□ -0.86
CCDC171-204ENST00000470191 ATP8B3O60423 1300 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 AP1G2O75843 785 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 IL12RB1P42701 662 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 TPMTP51580 245 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 MYL6P60660 151 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 SEMG2Q02383 582 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 SURF1Q15526 300 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
CCDC171-204ENST00000470191 OVCA2Q8WZ82 227 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 CCDC127Q96BQ5 260 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
CCDC171-204ENST00000470191 SMYD3Q9H7B4 428 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 ITM2CQ9NQX7 267 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 USP36Q9P275 1121 aaKnown RBP9.64□□□□□ -0.87
CCDC171-204ENST00000470191 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 CCDC39Q9UFE4 941 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 RAI2Q9Y5P3 530 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 GOLGA4Q13439 2230 aaKnown RBP9.64□□□□□ -0.87
CCDC171-204ENST00000470191 ACACAQ13085 2346 aa9.64□□□□□ -0.87
CCDC171-204ENST00000470191 CKAP5Q14008 2032 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 A0A087WV48 116 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CYSRT1A8MQ03 144 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 METTL12A8MUP2 240 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CBX4O00257 560 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 GFRA2O00451 464 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CLIC2O15247 247 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 SYNCRIPO60506 623 aaKnown RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 PHACTR2O75167 634 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 TACC1O75410 805 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 BEST1O76090 585 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 HMBSP08397 361 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CISD3P0C7P0 127 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 ZNF883P0CG24 379 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 HLA-EP13747 358 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CCDC130P13994 396 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 PLA2G2AP14555 144 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 EIF2S3P41091 472 aaKnown RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 CYP2J2P51589 502 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 MAP3K7CLP57077 242 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 TRPC3Q13507 836 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 NUMA1Q14980 2115 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 SUZ12Q15022 739 aaKnown RBP9.63□□□□□ -0.87
CCDC171-204ENST00000470191 KIF19Q2TAC6 998 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 IL27RAQ6UWB1 636 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 LRRC69Q6ZNQ3 347 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 PAQR9Q6ZVX9 377 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 ZNF605Q86T29 641 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 ACOT1Q86TX2 421 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 WDR49Q8IV35 697 aa9.63□□□□□ -0.87
CCDC171-204ENST00000470191 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms