RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PHKBQ93100 1093 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 TAAR1Q96RJ0 339 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 DPYSL5Q9BPU6 564 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PDCD2LQ9BRP1 358 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 LLPHQ9BRT6 129 aaKnown RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ENKD1Q9H0I2 346 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 AZI2Q9H6S1 392 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 AGO3Q9H9G7 860 aaKnown RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 INTUQ9ULD6 942 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 OAZ3Q9UMX2 235 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PCDHA6Q9UN73 950 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ATP11BQ9Y2G3 1177 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ELP1O95163 1332 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 STK36Q9NRP7 1315 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 SYNRGQ9UMZ2 1314 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 NID2Q14112 1375 aa6.96□□□□□ -1.29
PTCD3-208ENST00000469585 CCDC154A6NI56 674 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 FAM171A2A8MVW0 826 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 LAMTOR5O43504 91 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 PDCP20941 246 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 CST5P28325 142 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 ADSLP30566 484 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 KRT2P35908 639 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 ACLYP53396 1101 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 DUSP8Q13202 625 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 NONOQ15233 471 aaKnown RBP eCLIP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 UAP1L1Q3KQV9 507 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 CXorf57Q6NSI4 855 aaKnown RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 USP17L6PQ6QN14 398 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 HSCBQ8IWL3 235 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 GPR135Q8IZ08 494 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 MORC4Q8TE76 937 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 ZNF480Q8WV37 535 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 SPATA33Q96N06 139 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 AIFM3Q96NN9 605 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 LMF1Q96S06 567 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 MTG1Q9BT17 334 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 ZMYND12Q9H0C1 365 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 MTIF3Q9H2K0 278 aaKnown RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 ZCCHC4Q9H5U6 513 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 MSL2Q9HCI7 577 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 TRPS1Q9UHF7 1281 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 NOL7Q9UMY1 257 aaKnown RBP6.96□□□□□ -1.3
PTCD3-208ENST00000469585 SIK3Q9Y2K2 1263 aa6.96□□□□□ -1.3
PTCD3-208ENST00000469585 PQBP1O60828 265 aaKnown RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GGPS1O95749 300 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 ASGR1P07306 291 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GCFC2P16383 781 aaKnown RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 LPOP22079 712 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 SLC6A9P48067 706 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GHRHRQ02643 423 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 RIN1Q13671 783 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 UBE2SQ16763 222 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 C3orf36Q3SXR2 165 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 JAKMIP3Q5VZ66 844 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 FAM160B1Q5W0V3 765 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 KRT40Q6A162 431 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 EPM2AIP1Q7L775 607 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 RSPH3Q86UC2 560 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 CMTM4Q8IZR5 234 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 BLIDQ8IZY5 108 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 PRR18Q8N4B5 295 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 PPTC7Q8NI37 304 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GLG1Q92896 1179 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GTF3C6Q969F1 213 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 C8orf76Q96K31 380 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 CCDC43Q96MW1 224 aaKnown RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 GTPBP4Q9BZE4 634 aaKnown RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 BCO1Q9HAY6 547 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 TBC1D22BQ9NU19 505 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 RTEL1Q9NZ71 1219 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 VPS54Q9P1Q0 977 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 TPCN1Q9ULQ1 816 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 SMC3Q9UQE7 1217 aa6.95□□□□□ -1.3
PTCD3-208ENST00000469585 KIAA0100Q14667 2235 aaKnown RBP6.95□□□□□ -1.3
PTCD3-208ENST00000469585 M0QZ92 97 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 MEIS2O14770 477 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 NRP1O14786 923 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 DKC1O60832 514 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTCD3-208ENST00000469585 PPFIA4O75335 1185 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ITGA10O75578 1167 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ENDOD1O94919 500 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 GASTP01350 101 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 RPLP2P05387 115 aaKnown RBP6.94□□□□□ -1.3
PTCD3-208ENST00000469585 CLTBP09497 229 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 GYPEP15421 78 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 CR2P20023 1033 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ECHS1P30084 290 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 CRHR1P34998 444 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 SREBF1P36956 1147 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 SP4Q02446 784 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ITGA7Q13683 1181 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 GTF2H3Q13889 308 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 LY6KQ17RY6 165 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 CEP55Q53EZ4 464 aa6.94□□□□□ -1.3
PTCD3-208ENST00000469585 ATAT1Q5SQI0 421 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms