RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 MCM9Q9NXL9 1143 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 USP17L3A6NCW0 530 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 USP17L4A6NCW7 530 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIM64A6NGJ6 449 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SNAP23O00161 211 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 TBX3O15119 743 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC22A1O15245 554 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SORBS2O94875 1100 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SERPINB2P05120 415 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 BPGMP07738 259 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SNRPAP09012 282 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 COX4I1P13073 169 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 P4HA1P13674 534 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF26P17031 533 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 GNL1P36915 607 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 NLRP11P59045 1033 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 NSUN2Q08J23 767 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 CBLBQ13191 982 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 MTMR2Q13614 643 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 STXBP5Q5T5C0 1151 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 PDPK2PQ6A1A2 396 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ANKRD26P1Q6NSI1 321 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 VASH1Q7L8A9 365 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 USP17L1Q7RTZ2 530 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SETD3Q86TU7 594 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 RHPN2Q8IUC4 686 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 COLGALT2Q8IYK4 626 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 PDIK1LQ8N165 341 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 TMEM102Q8N9M5 508 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 OR7G1Q8NGA0 311 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 LILRB4Q8NHJ6 448 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 TMEM174Q8WUU8 243 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 TFB1MQ8WVM0 346 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 CCDC127Q96BQ5 260 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 EBF4Q9BQW3 602 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FRMD8Q9BZ67 464 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 COPS7BQ9H9Q2 264 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 AGPAT3Q9NRZ7 376 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 GPRC5DQ9NZD1 345 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 DNPEPQ9ULA0 475 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP3A7-CYP3A51PA0A087WV96 503 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF839A8K0R7 811 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 NOTOA8MTQ0 251 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 TTC34A8MYJ7 566 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GCATO75600 419 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 TPPPO94811 219 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 FAM13AO94988 1023 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ATE1O95260 518 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT75O95678 551 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 KITP10721 976 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 BMP3P12645 472 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP11B1P15538 503 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 EIF2AK2P19525 551 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 PROZP22891 400 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP3A7P24462 503 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MRPS22P82650 360 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 DMPKQ09013 629 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GALNT2Q10471 571 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GRSF1Q12849 480 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ABCB5Q2M3G0 1257 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC26A11Q86WA9 606 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CATSPER3Q86XQ3 398 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 LILRA2Q8N149 483 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CPSF7Q8N684 471 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 NAT8LQ8N9F0 302 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GLIS1Q8NBF1 620 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF512Q96ME7 567 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 PKP2Q99959 881 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 TUBA1CQ9BQE3 449 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CDH19Q9H159 772 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CXorf21Q9HAI6 301 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MARCOQ9UEW3 520 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 DAPK2Q9UIK4 370 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CPQQ9Y646 472 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 DDX60LQ5H9U9 1706 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 MYH9P35579 1960 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 FER1L6Q2WGJ9 1857 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 A0A1B0GTW7 788 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC22A2O15244 555 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CAPN15O75808 1086 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 SLITRK3O94933 977 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 ECE1P42892 770 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT6CP48668 564 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP2J2P51589 502 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 CHRNDQ07001 517 aa9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 NFX1Q12986 1120 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIM71Q2Q1W2 868 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms