RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 POC1B-GALNT4F8VUJ3 575 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 PLA2G6O60733 806 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 PRAMEF2O60811 474 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 FOXF2Q12947 444 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 ATP1A4Q13733 1029 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 UBE4AQ14139 1066 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 MAPKAPK3Q16644 382 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 AWAT1Q58HT5 328 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 GALNT4Q8N4A0 578 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 DDB2Q92466 427 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 KAZALD1Q96I82 304 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 VPS50Q96JG6 964 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 ASB2Q96Q27 587 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 SAP30LQ9HAJ7 183 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 VPS45Q9NRW7 570 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 ADARB2Q9NS39 739 aaKnown RBP6.31□□□□□ -1.4
XRN1-207ENST00000468894 CEP83Q9Y592 693 aa6.31□□□□□ -1.4
XRN1-207ENST00000468894 MBPP02686 304 aaPredicted RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 CHRM5P08912 532 aaPredicted RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 ATF7P17544 494 aaPredicted RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 GPC5P78333 572 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 TXNL4AP83876 142 aaKnown RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 CFHR3Q02985 330 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 NSUN2Q08J23 767 aaKnown RBP eCLIP6.3□□□□□ -1.4
XRN1-207ENST00000468894 LARS2Q15031 903 aaKnown RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 MORC1Q86VD1 984 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 P3H2Q8IVL5 708 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 SRRM1Q8IYB3 904 aaKnown RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 PRR11Q96HE9 360 aaPredicted RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 FYTTD1Q96QD9 318 aaKnown RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 NECTIN3Q9NQS3 549 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 FLRT1Q9NZU1 646 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
XRN1-207ENST00000468894 FNDC1Q4ZHG4 1894 aaPredicted RBP6.3□□□□□ -1.4
XRN1-207ENST00000468894 BTBD19C9JJ37 291 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 UBE2Q2LH0YL09 131 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 DHHO43323 396 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 GCATO75600 419 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 USP1O94782 785 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 CYP2A6P11509 494 aaPredicted RBP6.29□□□□□ -1.4
XRN1-207ENST00000468894 DRD1P21728 446 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 PPM1AP35813 382 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 HTR3AP46098 478 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 GRM1Q13255 1194 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 HDAC1Q13547 482 aaPredicted RBP6.29□□□□□ -1.4
XRN1-207ENST00000468894 KCNJ12Q14500 433 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 RAB30Q15771 203 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 FAM90A2PQ658T7 463 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 DCDC5Q6ZRR9 648 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 TOGARAM2Q6ZUX3 1019 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 C12orf76Q8N812 135 aaPredicted RBP6.29□□□□□ -1.4
XRN1-207ENST00000468894 C8orf58Q8NAV2 365 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
XRN1-207ENST00000468894 ADAMTS18Q8TE60 1221 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 IPO4Q8TEX9 1081 aaKnown RBP6.29□□□□□ -1.4
XRN1-207ENST00000468894 GRAMD1AQ96CP6 724 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 USP29Q9HBJ7 922 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 TM7SF3Q9NS93 570 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 SLC39A10Q9ULF5 831 aa6.29□□□□□ -1.4
XRN1-207ENST00000468894 H3BNC9 293 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 PCDH17O14917 1159 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 HNRNPDLO14979 420 aaKnown RBP6.28□□□□□ -1.4
XRN1-207ENST00000468894 VIPP01282 170 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 IL6STP40189 918 aaPredicted RBP6.28□□□□□ -1.4
XRN1-207ENST00000468894 DGKQP52824 942 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 BTKQ06187 659 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 DNASE1L3Q13609 305 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 KCNB1Q14721 858 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 CERKLQ49MI3 558 aaPredicted RBP6.28□□□□□ -1.4
XRN1-207ENST00000468894 TMEM196Q5HYL7 178 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 SKAP1Q86WV1 359 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 PNISRQ8TF01 805 aaKnown RBP6.28□□□□□ -1.4
XRN1-207ENST00000468894 VOPP1Q96AW1 172 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 C5orf34Q96MH7 638 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 TTLL2Q9BWV7 592 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 FZD4Q9ULV1 537 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 DTNAQ9Y4J8 743 aa6.28□□□□□ -1.4
XRN1-207ENST00000468894 ZSCAN9O15535 394 aaPredicted RBP6.27□□□□□ -1.41
XRN1-207ENST00000468894 CELA2AP08217 269 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 CYP2D6P10635 497 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 GALNSP34059 522 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 RAE1P78406 368 aaKnown RBP6.27□□□□□ -1.41
XRN1-207ENST00000468894 SRSF4Q08170 494 aaKnown RBP6.27□□□□□ -1.41
XRN1-207ENST00000468894 CCDC15Q0P6D6 951 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 MFSD13AQ14CX5 517 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 CEP78Q5JTW2 689 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 TMEM65Q6PI78 240 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 CLASRPQ8N2M8 674 aaKnown RBP6.27□□□□□ -1.41
XRN1-207ENST00000468894 ACRBPQ8NEB7 543 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 CCDC17Q96LX7 622 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 HS6ST2Q96MM7 605 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 ARFGAP3Q9NP61 516 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 FSCN3Q9NQT6 498 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 IGSF9Q9P2J2 1179 aa6.27□□□□□ -1.41
XRN1-207ENST00000468894 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
XRN1-207ENST00000468894 FYB1O15117 783 aa6.26□□□□□ -1.41
XRN1-207ENST00000468894 TMIGD3P0DMS9 266 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms