RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 PATJQ8NI35 1801 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 BECN2A8MW95 431 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
CDHR3-205ENST00000468143 THAP12O43422 761 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 KAT7O95251 611 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 APODP05090 189 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 CORO1AP31146 461 aaKnown RBP12.1□□□□□ -0.47
CDHR3-205ENST00000468143 COG7P83436 770 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 LONP2Q86WA8 852 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 CLEC4CQ8WTT0 213 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 CDK5RAP1Q96SZ6 601 aaKnown RBP12.1□□□□□ -0.47
CDHR3-205ENST00000468143 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 SIX2Q9NPC8 291 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 DNAJC12Q9UKB3 198 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
CDHR3-205ENST00000468143 TBC1D3BA6NDS4 549 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 HOXC11O43248 304 aaPredicted RBP12.09□□□□□ -0.47
CDHR3-205ENST00000468143 TULP3O75386 442 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
CDHR3-205ENST00000468143 PNMA6AP0CW24 399 aaPredicted RBP12.09□□□□□ -0.47
CDHR3-205ENST00000468143 GNA15P30679 374 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 TIE1P35590 1138 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 GPD2P43304 727 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 DAOAP59103 153 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 KCNMA1Q12791 1236 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 DMC1Q14565 340 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 STILQ15468 1287 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 Q6ZNB5 142 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 PRR23BQ6ZRT6 265 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 DENND1CQ8IV53 801 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 ETFBKMTQ8IXQ9 262 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 P2RY11Q96G91 374 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 BBS2Q9BXC9 721 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 CNGB3Q9NQW8 809 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 DEC1Q9P2X7 70 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
CDHR3-205ENST00000468143 NFE2L3Q9Y4A8 694 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 F5P12259 2224 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 CACNA1IQ9P0X4 2223 aa12.09□□□□□ -0.47
CDHR3-205ENST00000468143 HELZP42694 1942 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 FOXN3O00409 490 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 MSI1O43347 362 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 MED7O43513 233 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 KLF8O95600 359 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 TYRP14679 529 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 GRIA2P42262 883 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 SIM2Q14190 667 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 TCP11X2Q5H9J9 407 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 SYT13Q7L8C5 426 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 ENOX1Q8TC92 643 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 VPS16Q9H269 839 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 EPC1Q9H2F5 836 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 DNAJC17Q9NVM6 304 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 NCDNQ9UBB6 729 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 CYTH4Q9UIA0 394 aa12.08□□□□□ -0.48
CDHR3-205ENST00000468143 SMG5Q9UPR3 1016 aaKnown RBP12.08□□□□□ -0.48
CDHR3-205ENST00000468143 A0A0A0MRY4 1105 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 FAM170AA1A519 330 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 TSPAN3O60637 253 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 EIF2DP41214 584 aaKnown RBP12.07□□□□□ -0.48
CDHR3-205ENST00000468143 WASP42768 502 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
CDHR3-205ENST00000468143 MRPS21P82921 87 aaKnown RBP12.07□□□□□ -0.48
CDHR3-205ENST00000468143 CT47A1Q5JQC4 288 aaPredicted RBP12.07□□□□□ -0.48
CDHR3-205ENST00000468143 C10orf76Q5T2E6 689 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 GRAMD4Q6IC98 578 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 DPY19L2P1Q6NXN4 242 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 CEP68Q76N32 757 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 WDR5BQ86VZ2 330 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 PASD1Q8IV76 773 aa12.07□□□□□ -0.48
CDHR3-205ENST00000468143 KIAA2013Q8IYS2 634 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms