RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 HCN2Q9UL51 889 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 STARD13Q9Y3M8 1113 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 PCDHA5Q9Y5H7 936 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 ADAMTS9Q9P2N4 1935 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 HHLA1C9JL84 531 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 ZBTB24O43167 697 aaPredicted RBP18.2■□□□□ 0.5
TRIM56-203ENST00000467847 CACNG3O60359 315 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 KIF20AO95235 890 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 ENGP17813 658 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 ACO1P21399 889 aaKnown RBP18.2■□□□□ 0.5
TRIM56-203ENST00000467847 CMA1P23946 247 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 EGFLAMQ63HQ2 1017 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 SLC36A4Q6YBV0 504 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 CHPFQ8IZ52 775 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 CYFIP2Q96F07 1278 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 NT5C1AQ9BXI3 368 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 MARK1Q9P0L2 795 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 PILRBQ9UKJ0 227 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
TRIM56-203ENST00000467847 A0A1W2PQF6 199 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 A0A1W2PQH9 124 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 TMEM8BA6NDV4 472 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 MAPK13O15264 365 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 CFIP05156 583 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 TRIM49P0CI25 452 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 TRIM49CP0CI26 452 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 IGF2RP11717 2491 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 RARGP13631 454 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 CD58P19256 250 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 NR2F2P24468 414 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 HOXD12P35452 270 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 GCLMP48507 274 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 C10orf120Q5SQS8 335 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 SLC23A3Q6PIS1 610 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 INTS8Q75QN2 995 aaKnown RBP18.19■□□□□ 0.5
TRIM56-203ENST00000467847 DEFB119Q8N690 84 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 KDF1Q8NAX2 398 aaPredicted RBP18.19■□□□□ 0.5
TRIM56-203ENST00000467847 DEFB124Q8NES8 71 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 ERLEC1Q96DZ1 483 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 ACOX2Q99424 681 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 CYP3A43Q9HB55 503 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 NMUR1Q9HB89 426 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 APOBEC3GQ9HC16 384 aaKnown RBP18.19■□□□□ 0.5
TRIM56-203ENST00000467847 PNPLA8Q9NP80 782 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRIM56-203ENST00000467847 DNMT3LQ9UJW3 386 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 NUDT5Q9UKK9 219 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 HPSEQ9Y251 543 aa18.19■□□□□ 0.5
TRIM56-203ENST00000467847 CACNA1EQ15878 2313 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 PCNX2A6NKB5 2137 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 MDM4O15151 490 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 KRT13P13646 458 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 PLA2G4AP47712 749 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 KLHDC10Q6PID8 442 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 TOGARAM2Q6ZUX3 1019 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 TAS1R2Q8TE23 839 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 BHMTQ93088 406 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 CCDC47Q96A33 483 aaKnown RBP18.18■□□□□ 0.5
TRIM56-203ENST00000467847 ADAM33Q9BZ11 813 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 DNAI2Q9GZS0 605 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 NIF3L1Q9GZT8 377 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 MMRN2Q9H8L6 949 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 NAGPAQ9UK23 515 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 SPEGQ15772 3267 aa18.18■□□□□ 0.5
TRIM56-203ENST00000467847 ZFYVE26Q68DK2 2539 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 PRRT4C9JH25 899 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 CILPO75339 1184 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 ZNF217O75362 1048 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 NDUFV2P19404 249 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 SPINK2P20155 84 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 SYKP43405 635 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 DGKGP49619 791 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 ATXN3P54252 364 aaPredicted RBP18.17■□□□□ 0.5
TRIM56-203ENST00000467847 PPP3CAQ08209 521 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 DUOXA1Q1HG43 343 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 PEAR1Q5VY43 1037 aaPredicted RBP18.17■□□□□ 0.5
TRIM56-203ENST00000467847 KIAA1211LQ6NV74 962 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 Q6ZNB5 142 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 TADA2BQ86TJ2 420 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 FAM186BQ8IYM0 893 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 CCDC150Q8NCX0 1101 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 CEP76Q8TAP6 659 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 IPO4Q8TEX9 1081 aaKnown RBP18.17■□□□□ 0.5
TRIM56-203ENST00000467847 SPATA32Q96LK8 384 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 GTPBP2Q9BX10 602 aaKnown RBP18.17■□□□□ 0.5
TRIM56-203ENST00000467847 SLC32A1Q9H598 525 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 SLC6A14Q9UN76 642 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 CYP8B1Q9UNU6 501 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 ASPMQ8IZT6 3477 aa18.17■□□□□ 0.5
TRIM56-203ENST00000467847 IGHV1OR15-9A0A0B4J2B8 117 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 PSMC2P35998 433 aaKnown RBP18.16■□□□□ 0.5
TRIM56-203ENST00000467847 PSEN1P49768 467 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 KIF11P52732 1056 aa18.16■□□□□ 0.5
TRIM56-203ENST00000467847 GFPT1Q06210 699 aaPredicted RBP18.16■□□□□ 0.5
TRIM56-203ENST00000467847 ZNF33AQ06730 810 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms