RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 IL21RQ9HBE5 538 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
UBR4-211ENST00000467272 CACNA2D2Q9NY47 1150 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 WDR35Q9P2L0 1181 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 ZNF462Q96JM2 2506 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
UBR4-211ENST00000467272 MAOBP27338 520 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 ZNF132P52740 706 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 CDH8P55286 799 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 TNNC1P63316 161 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 CUL4AQ13619 759 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 FUT11Q495W5 492 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 FAM173BQ6P4H8 233 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 CCDC65Q8IXS2 484 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 MDM1Q8TC05 714 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 SMARCD1Q96GM5 515 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 PANK2Q9BZ23 570 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
UBR4-211ENST00000467272 PCDHGB2Q9Y5G2 931 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 CEP192Q8TEP8 1941 aa12.89□□□□□ -0.35
UBR4-211ENST00000467272 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 VNN1O95497 513 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 TNNI1P19237 187 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 STAT6P42226 847 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 GPRIN1Q7Z2K8 1008 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 XXYLT1Q8NBI6 393 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 SCML2Q9UQR0 700 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
UBR4-211ENST00000467272 STON1Q9Y6Q2 735 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 KNL1Q8NG31 2342 aa12.88□□□□□ -0.35
UBR4-211ENST00000467272 ASXL3Q9C0F0 2248 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 A0A087WV48 116 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 NPC1O15118 1278 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 CILPO75339 1184 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 AP1G2O75843 785 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 KLKB1P03952 638 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 C4BPAP04003 597 aaKnown RBP12.87□□□□□ -0.35
UBR4-211ENST00000467272 IRF1P10914 325 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 GNSP15586 552 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 TXLNAP40222 546 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
UBR4-211ENST00000467272 DGKGP49619 791 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 TPMTP51580 245 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 COPAP53621 1224 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 SDE2Q6IQ49 451 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 PARD3BQ8TEW8 1205 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 FBXO44Q9H4M3 255 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.351e-8■□□□□ 10.5
UBR4-211ENST00000467272 HMGXB4Q9UGU5 601 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 PTPRBP23467 1997 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 UBE4BO95155 1302 aa12.87□□□□□ -0.35
UBR4-211ENST00000467272 MGAQ8IWI9 3026 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 ATMQ13315 3056 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 ATXN1LP0C7T5 689 aaKnown RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 NCAM1P13591 858 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 ATP5C1P36542 298 aaKnown RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 IL12RB1P42701 662 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 CASP4P49662 377 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 MFAP3P55082 362 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 PTPRNQ16849 979 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 HLA-BQ31612 363 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 TPGS1Q6ZTW0 290 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 SCD5Q86SK9 330 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
UBR4-211ENST00000467272 SLC2A14Q8TDB8 520 aa12.86□□□□□ -0.35
UBR4-211ENST00000467272 ERLEC1Q96DZ1 483 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms