RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 CCDC110Q8TBZ0 833 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 LPPQ93052 612 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 FAM149B1Q96BN6 582 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
HPS1-208ENST00000467246 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
HPS1-208ENST00000467246 DUSP16Q9BY84 665 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.88□□□□□ -0.51
HPS1-208ENST00000467246 PSMC3IPQ9P2W1 217 aaPredicted RBP11.88□□□□□ -0.51
HPS1-208ENST00000467246 ST3GAL5Q9UNP4 418 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 MFHAS1Q9Y4C4 1052 aa11.88□□□□□ -0.51
HPS1-208ENST00000467246 XPO1O14980 1071 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 SNX3O60493 162 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 FSBPO95073 299 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 PTPN1P18031 435 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 LRPAP1P30533 357 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 FOXN2P32314 431 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 ACADSBP45954 432 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 GDF6Q6KF10 455 aaPredicted RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 ARCQ7LC44 396 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 GAD1Q99259 594 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 PAFAH2Q99487 392 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 TMPRSS4Q9NRS4 437 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 ETNK2Q9NVF9 386 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 PAK5Q9P286 719 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 SMAPO00193 183 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 MATKP42679 507 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 DCAF6Q58WW2 860 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 RGMBQ6NW40 437 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 PPP1R21Q6ZMI0 780 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 DENND1AQ8TEH3 1009 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 MAGEB18Q96M61 343 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 CSPG4P5Q96PW8 444 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 SMC6Q96SB8 1091 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
HPS1-208ENST00000467246 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 MIOSQ9NXC5 875 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 TEX264Q9Y6I9 313 aa11.87□□□□□ -0.51
HPS1-208ENST00000467246 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CCT8L1PA6NM43 557 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 KBTBD13C9JR72 458 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CHADO15335 359 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ASMTLO95671 621 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CPP00450 1065 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 GOT1P17174 413 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 AMPD1P23109 780 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 SCNN1AP37088 669 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ITIH4Q14624 930 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 RASA2Q15283 850 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 MDH1BQ5I0G3 518 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 EFHC1Q5JVL4 640 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 VSIG1Q86XK7 387 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 SGSM3Q96HU1 749 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ARHGAP39Q9C0H5 1083 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 GTF2IRD1Q9UHL9 959 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 GABRDO14764 452 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 OAS1P00973 400 aaKnown RBP11.86□□□□□ -0.51
HPS1-208ENST00000467246 CHRNA1P02708 482 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 APRTP07741 180 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 NPR3P17342 541 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 KRT4P19013 534 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 TAC1P20366 129 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 SULT1E1P49888 294 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CLCNKBP51801 687 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ADGRD1Q6QNK2 874 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CLEC20AQ6ZU45 233 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 SENP8Q96LD8 212 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
HPS1-208ENST00000467246 DHRS4Q9BTZ2 278 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 ETNK1Q9HBU6 452 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 CRTAC1Q9NQ79 661 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 DDX43Q9NXZ2 648 aaKnown RBP11.86□□□□□ -0.51
HPS1-208ENST00000467246 GGT7Q9UJ14 662 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 GRID1Q9ULK0 1009 aa11.86□□□□□ -0.51
HPS1-208ENST00000467246 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 CFAP69A5D8W1 941 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 M0QZ92 97 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.514e-7■■□□□ 13.5
HPS1-208ENST00000467246 TYROBPO43914 113 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 METTL18O95568 372 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 CA4P22748 312 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 MAP3K7CLP57077 242 aa11.85□□□□□ -0.51
HPS1-208ENST00000467246 YWHAZP63104 245 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms