RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 DNAJB14Q8TBM8 379 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 KIAA1191Q96A73 305 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 IQCDQ96DY2 449 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 ZDHHC12Q96GR4 267 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 FAM227BQ96M60 508 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 TMEM8AQ9HCN3 771 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 ZNF212Q9UDV6 495 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 OR2W5A6NFC9 320 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 MYMKA6NI61 221 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 DSCR3O14972 297 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 PLIN1O60240 522 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 RASSF9O75901 435 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 VNN1O95497 513 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 FGAP02671 866 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 SNHG28P0DPA3 235 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 HARSP12081 509 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 UQCRC1P31930 480 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 CCNIQ14094 377 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 KLHL22Q53GT1 634 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 CERCAMQ5T4B2 595 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 SHC4Q6S5L8 630 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 DPY19L3Q6ZPD9 716 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 MORC1Q86VD1 984 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 ZDHHC17Q8IUH5 632 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 SIRT6Q8N6T7 355 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 MMS19Q96T76 1030 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 EFHD1Q9BUP0 239 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 NLRC4Q9NPP4 1024 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 AMFRQ9UKV5 643 aa5.29□□□□□ -1.56
PRPF40A-205ENST00000467114 LY6G6EA0A0G2JKS1 128 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 TMEM232C9JQI7 657 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 RAB27BO00194 218 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 DHHO43323 396 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 THAP12O43422 761 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 PLA2G6O60733 806 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 HTR7P34969 479 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 IL6STP40189 918 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 TIRAPP58753 221 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 LINC00205P59089 165 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 PSG6Q00889 435 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 MORC3Q14149 939 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 KCNAB1Q14722 419 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 C4orf46Q504U0 113 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 RNF44Q7L0R7 432 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 SPICE1Q8N0Z3 855 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 VCPIP1Q96JH7 1222 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 C17orf80Q9BSJ5 609 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 EBF3Q9H4W6 596 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 ZSCAN32Q9NX65 697 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 ZNF580Q9UK33 172 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 ITGB1BP2Q9UKP3 347 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 COL15A1P39059 1388 aa5.28□□□□□ -1.56
PRPF40A-205ENST00000467114 AQP7P3A6NL99 342 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 SRGAP2O75044 1071 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 CBFA2T3O75081 653 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 INMTO95050 263 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 TMEM191BP0C7N4 346 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 ARP10275 920 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 TKTP29401 623 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 GKP32189 559 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 HSPA7P48741 367 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 COPAP53621 1224 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 ARL13BQ3SXY8 428 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 RRAGBQ5VZM2 374 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 USP49Q70CQ1 688 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 GLIS1Q8NBF1 620 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 PNISRQ8TF01 805 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 IPCEF1Q8WWN9 437 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 CCDC17Q96LX7 622 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 ADGRE3Q9BY15 652 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 HDAC9Q9UKV0 1011 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 MAN2B2Q9Y2E5 1009 aa5.27□□□□□ -1.57
PRPF40A-205ENST00000467114 ABHD14A-ACY1A0A1B0GW23 586 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 PMPCBO75439 489 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 GCATO75600 419 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 PIAS2O75928 621 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 MT-CO3P00414 261 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 CBSLP0DN79 551 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 MYL4P12829 197 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 HGFP14210 728 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 PRF1P14222 555 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 TPH1P17752 444 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 EEF1GP26641 437 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 CBSP35520 551 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 PRKAG1P54619 331 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 SUMO2P61956 95 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 GHRHRQ02643 423 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 HDAC1Q13547 482 aaPredicted RBP5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 RUSC1-AS1Q66K80 236 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 USP17L6PQ6QN14 398 aa5.26□□□□□ -1.57
PRPF40A-205ENST00000467114 BEND5Q7L4P6 421 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms