RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 CMTM8Q8IZV2 173 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 CELF5Q8N6W0 485 aaKnown RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 RIN3Q8TB24 985 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 MRPS31Q92665 395 aaKnown RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 USP13Q92995 863 aaPredicted RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 CLDN23Q96B33 292 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 TRMT2BQ96GJ1 504 aaKnown RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 PCED1BQ96HM7 432 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 CEP295NLQ96MC4 621 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 SLITRK1Q96PX8 696 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 PANX2Q96RD6 677 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 SLC22A12Q96S37 553 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 NELL2Q99435 816 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 BAG1Q99933 345 aaPredicted RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 LMAN1LQ9HAT1 526 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 TRPC7Q9HCX4 862 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 RBM12Q9NTZ6 932 aaKnown RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 TMEM51Q9NW97 253 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 OBP2AQ9NY56 170 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 UXTQ9UBK9 157 aaPredicted RBP6.95□□□□□ -1.3
UBXN4-205ENST00000467065 STRIP2Q9ULQ0 834 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 SIK3Q9Y2K2 1263 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 FHOD1Q9Y613 1164 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 CEP250Q9BV73 2442 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 SDK1Q7Z5N4 2213 aa6.95□□□□□ -1.3
UBXN4-205ENST00000467065 NUP205Q92621 2012 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 C2orf78A6NCI8 922 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 LRRC53A6NM62 1247 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 F8VP50 259 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CLDN5O00501 218 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CILPO75339 1184 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 AP1G2O75843 785 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 LSM8O95777 96 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CKMP06732 381 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 RALAP11233 206 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ARSAP15289 507 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CYP11B1P15538 503 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 WEE1P30291 646 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 PPP3CCP48454 512 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CACNA2D1P54289 1103 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ADKP55263 362 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 USP46P62068 366 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CDR2Q01850 454 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 GOLGA8FQ08AF8 430 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 GOLGA8DPQ0D2H9 430 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 INCA1Q0VD86 236 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 BST2Q10589 180 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 IFRD2Q12894 506 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ORC1Q13415 861 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 PON2Q15165 354 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 TAF3Q5VWG9 929 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 GJB7Q6PEY0 223 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ZC3H14Q6PJT7 736 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 Q6ZS52 159 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 KIAA1328Q86T90 577 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 MON1AQ86VX9 555 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ZDHHC17Q8IUH5 632 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ARHGEF19Q8IW93 802 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ANKRD52Q8NB46 1076 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 SLC2A14Q8TDB8 520 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 RNF139Q8WU17 664 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ZNF606Q8WXB4 792 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 SHC3Q92529 594 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 MYRFLQ96LU7 910 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 CDK5RAP1Q96SZ6 601 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 HNRNPABQ99729 332 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 AGPAT1Q99943 283 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 SDCBP2Q9H190 292 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 C8orf33Q9H7E9 229 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 KIF9Q9HAQ2 790 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 APOBEC3GQ9HC16 384 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 MRPL47Q9HD33 250 aaKnown RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 DMAP1Q9NPF5 467 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 PRMT8Q9NR22 394 aaPredicted RBP6.94□□□□□ -1.3
UBXN4-205ENST00000467065 GKN1Q9NS71 199 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 ABHD10Q9NUJ1 306 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 FAM49BQ9NUQ9 324 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 TDP1Q9NUW8 608 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 TMEM30AQ9NV96 361 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 COMMD8Q9NX08 183 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 AIPL1Q9NZN9 384 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 HMGXB4Q9UGU5 601 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 LCMT1Q9UIC8 334 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 FBXO4Q9UKT5 387 aa6.94□□□□□ -1.3
UBXN4-205ENST00000467065 THADAQ6YHU6 1953 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 DNAH14Q0VDD8 3507 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 TRAV19A0A0A6YYK7 116 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 OTOL1A6NHN0 477 aaPredicted RBP6.93□□□□□ -1.3
UBXN4-205ENST00000467065 ZSCAN12O43309 604 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 MFAP3LO75121 409 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 FBXO21O94952 628 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 LMNAP02545 664 aaKnown RBP6.93□□□□□ -1.3
UBXN4-205ENST00000467065 CALB1P05937 261 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 MYBL1P10243 752 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 CHRNB1P11230 501 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 YWHAQP27348 245 aa6.93□□□□□ -1.3
UBXN4-205ENST00000467065 HOXC13P31276 330 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms