RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 A1CFQ9NQ94 594 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SEPT11Q9NVA2 429 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SCAF8Q9UPN6 1271 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CTNND2Q9UQB3 1225 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CAB39Q9Y376 341 aaPredicted RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 MRPL11Q9Y3B7 192 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 RBBP6Q7Z6E9 1792 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 AP3D1O14617 1153 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 ADH1CP00326 375 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CSF1P09603 554 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SRGAP2CP0DJJ0 459 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 PAMP19021 973 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 RXRAP19793 462 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CDH3P22223 829 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 GRNP28799 593 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 USP8P40818 1118 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 LSSP48449 732 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CDK8P49336 464 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 DHPSP49366 369 aaPredicted RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 RAD23AP54725 363 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CHRNDQ07001 517 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 ADCY2Q08462 1091 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 NFIAQ12857 509 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 PDIA5Q14554 519 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 GRIK5Q16478 980 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 BROXQ5VW32 411 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 OGFOD3Q6PK18 319 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 PRPF39Q86UA1 669 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 RBM12BQ8IXT5 1001 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 FAM9CQ8IZT9 166 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SYNE4Q8N205 404 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 EFHBQ8N7U6 833 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 NOA1Q8NC60 698 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 OR1N1Q8NGS0 311 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 MDM1Q8TC05 714 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 TTC9Q92623 222 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 MVB12AQ96EY5 273 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SLC2A13Q96QE2 648 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 IRX2Q9BZI1 471 aaPredicted RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 EHD4Q9H223 541 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 ST6GALNAC4Q9H4F1 302 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 GDF3Q9NR23 364 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 BARHL2Q9NY43 387 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 ETAA1Q9NY74 926 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 HSPBP1Q9NZL4 362 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 STK17AQ9UEE5 414 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 TMEM59LQ9UK28 342 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CPSF3Q9UKF6 684 aaKnown RBP4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 NENFQ9UMX5 172 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 SNX12Q9UMY4 172 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 CLCA2Q9UQC9 943 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 ZBTB1Q9Y2K1 713 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 KCNMB2Q9Y691 235 aa4.63□□□□□ -1.67
CLCA3P-202ENST00000466454 TRAV6A0A075B6T7 132 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 A0A0U1RQJ8 604 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 CHURC1-FNTBB4DL54 471 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 KHNYNO15037 678 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 N4BP3O15049 544 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 SLC25A17O43808 307 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PLEKHA8P1O95397 391 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 C22orf31O95567 290 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 CRTAMO95727 393 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PRR35P0CG20 571 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 BMP1P13497 986 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 RAG1P15918 1043 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 SELPP16109 830 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 TCP1P17987 556 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 S100A5P33763 92 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 IGHMBP2P38935 993 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PLTPP55058 493 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PRKCZQ05513 592 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 FRG1Q14331 258 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 KARSQ15046 597 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PDCD1Q15116 288 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 MAPKAPK3Q16644 382 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 ZNF792Q3KQV3 632 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 USP39Q53GS9 565 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 FAM47CQ5HY64 1035 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 RRAGBQ5VZM2 374 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 ACAD10Q6JQN1 1059 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 NSMFQ6X4W1 530 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 LEKR1Q6ZMV7 388 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 TSPYL5Q86VY4 417 aaPredicted RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 CDH26Q8IXH8 852 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 GMCL1P1Q8NEA9 526 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 P2RX5Q93086 422 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 TMIGD2Q96BF3 282 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 SYTL4Q96C24 671 aaPredicted RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 TUBGCP3Q96CW5 907 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 NRBF2Q96F24 287 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 MTMR12Q9C0I1 747 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 BRD8Q9H0E9 1235 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 SH2D4AQ9H788 454 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 ZMAT3Q9HA38 289 aaKnown RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 VPS54Q9P1Q0 977 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 UBA2Q9UBT2 640 aaPredicted RBP4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 MAD2L2Q9UI95 211 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 PCDHA6Q9UN73 950 aa4.62□□□□□ -1.67
CLCA3P-202ENST00000466454 DTNAQ9Y4J8 743 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms