RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 CHPFQ8IZ52 775 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 TMEM199Q8N511 208 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 DIS3LQ8TF46 1054 aaKnown RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 PIGKQ92643 395 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 ZBTB45Q96K62 511 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 FAM84BQ96KN1 310 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 CAMK1GQ96NX5 476 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 SF3B5Q9BWJ5 86 aaKnown RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 BRINP2Q9C0B6 783 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 TCF7L1Q9HCS4 588 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 MDFICQ9P1T7 246 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 DNMT3BQ9UBC3 853 aaKnown RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 SPATA31A1Q5TZJ5 1347 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 AQP7P3A6NL99 342 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 TMEM233B4DJY2 109 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 H3BML4 177 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 PRPF4O43172 522 aaKnown RBP eCLIP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 PF4V1P10720 104 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 HGFP14210 728 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 HSPA6P17066 643 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 EN2P19622 333 aaPredicted RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 TNFRSF1BP20333 461 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 KLRC1P26715 233 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 PTDSS1P48651 473 aaKnown RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ARHGEF7Q14155 803 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 C9orf50Q5SZB4 431 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ZNF324BQ6AW86 544 aaPredicted RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ZDHHC24Q6UX98 284 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 P3H2Q8IVL5 708 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ADGRF4Q8IZF3 695 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 IQCF1Q8N6M8 205 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ASB5Q8WWX0 329 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 WDYHV1Q96HA8 205 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 PPP1R10Q96QC0 940 aaKnown RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 FCRL5Q96RD9 977 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 RBM38Q9H0Z9 239 aaKnown RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 FZD3Q9NPG1 666 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 PAPOLBQ9NRJ5 636 aaKnown RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 HOMER2Q9NSB8 354 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 DDX56Q9NY93 547 aaKnown RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 IP6K2Q9UHH9 426 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ANAPC4Q9UJX5 808 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 HDAC9Q9UKV0 1011 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 COG5Q9UP83 839 aa2.7□□□□□ -1.98
CCDC93-205ENST00000466171 TRIP12Q14669 1992 aaPredicted RBP2.7□□□□□ -1.98
CCDC93-205ENST00000466171 ZNF335Q9H4Z2 1342 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TMEM272A0A1B0GTI8 110 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 SERINC4A6NH21 518 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 H7C4K7 107 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 SPTLC2O15270 562 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TLX3O43711 291 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 RRP9O43818 475 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 UBXN7O94888 489 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 EPN2O95208 641 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 FGF3P11487 239 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TPH1P17752 444 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TFEBP19484 476 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 RPS6KB1P23443 525 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 SLC7A1P30825 629 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 MCM5P33992 734 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 MLH1P40692 756 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 ITGA8P53708 1063 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 EIF4A1P60842 406 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 GPC5P78333 572 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 STK3Q13188 491 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 MTA1Q13330 715 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 PTGR1Q14914 329 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 INPP5JQ15735 1006 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 MZT2AQ6P582 158 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 GSG1LQ6UXU4 331 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 NR4A3Q92570 626 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 MED30Q96HR3 178 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 KAZALD1Q96I82 304 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 HIST1H2AAQ96QV6 131 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TM2D2Q9BX73 214 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 STK31Q9BXU1 1019 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 ARHGAP39Q9C0H5 1083 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 DHX36Q9H2U1 1008 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 FAM83DQ9H4H8 585 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 ZMAT3Q9HA38 289 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 SMURF2Q9HAU4 748 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 NMRK2Q9NPI5 230 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 AASDHPPTQ9NRN7 309 aa2.69□□□□□ -1.98
CCDC93-205ENST00000466171 IPO11Q9UI26 975 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 G3BP2Q9UN86 482 aaKnown RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 HEMK1Q9Y5R4 338 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-205ENST00000466171 TTC34A8MYJ7 566 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 ZNF814B7Z6K7 855 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 PYCARD-AS1I3L0S3 204 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 INMTO95050 263 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 SLC3A2P08195 630 aaKnown RBP2.68□□□□□ -1.98
CCDC93-205ENST00000466171 FGF2P09038 288 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 PARP1P09874 1014 aaKnown RBP2.68□□□□□ -1.98
CCDC93-205ENST00000466171 TMEM225BP0DP42 221 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 POLD2P49005 469 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 ENTPD1P49961 510 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 NEK2P51955 445 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 P2RX3P56373 397 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 DEUP1Q05D60 604 aa2.68□□□□□ -1.98
CCDC93-205ENST00000466171 SLC29A2Q14542 456 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms