RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 TCEAL6Q6IPX3 200 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 Q6ZNB5 142 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 CYP2U1Q7Z449 544 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 TCEAL3Q969E4 200 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 XPO6Q96QU8 1125 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 WDR35Q9P2L0 1181 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 HCN2Q9UL51 889 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-203ENST00000466034 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 LNP1A1A4G5 178 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 CETN3O15182 167 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 CD58P19256 250 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 PMLP29590 882 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 NTSR1P30989 418 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 DPP6P42658 865 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 MXI1P50539 228 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 LPCAT2Q7L5N7 544 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 MBD1Q9UIS9 605 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
SOX2-OT-203ENST00000466034 NEDD8-MDP1E9PL57 170 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 TRIM24O15164 1050 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 SLC16A3O15427 465 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 KCNK5O95279 499 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 RALAP11233 206 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 TYRP14679 529 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 RAB41Q5JT25 222 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 SLC4A11Q8NBS3 891 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 JAKMIP2Q96AA8 810 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 GABRG3Q99928 467 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 BBS2Q9BXC9 721 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 CISHQ9NSE2 258 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 RMND1Q9NWS8 449 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 BCCIPQ9P287 314 aaKnown RBP eCLIP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 NAGPAQ9UK23 515 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-203ENST00000466034 A0A1W2PQF6 199 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GFRA2O00451 464 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 MDM4O15151 490 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 STC2O76061 302 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 CISD3P0C7P0 127 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 HOXB2P14652 356 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GABRG2P18507 467 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 HOXD12P35452 270 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 RAD23BP54727 409 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 COG7P83436 770 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 SHC2P98077 582 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 EGFLAMQ63HQ2 1017 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 SYT12Q8IV01 421 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 SMYD4Q8IYR2 804 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 FMR1NBQ8N0W7 255 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 RLN3Q8WXF3 142 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 DCLK3Q9C098 648 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 PI4KAP42356 2102 aa13.1□□□□□ -0.31
SOX2-OT-203ENST00000466034 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
SOX2-OT-203ENST00000466034 C4orf47A7E2U8 309 aa13.09□□□□□ -0.31
SOX2-OT-203ENST00000466034 PRRT4C9JH25 899 aa13.09□□□□□ -0.31
SOX2-OT-203ENST00000466034 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms