RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KIR2DL1P43626 348 aaPredicted RBP22.85■■□□□ 1.25
LIME1-203ENST00000465591 SLC8A3P57103 927 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 CLEC17AQ6ZS10 378 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 TPGS1Q6ZTW0 290 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 CAMKK1Q8N5S9 505 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 CRACR2AQ9BSW2 395 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 LRRC4Q9HBW1 653 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 LSM7Q9UK45 103 aaKnown RBP22.85■■□□□ 1.25
LIME1-203ENST00000465591 ABCA7Q8IZY2 2146 aa22.85■■□□□ 1.25
LIME1-203ENST00000465591 CCDC163A0A0D9SF12 145 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 FGFR1OPO95684 399 aaKnown RBP22.84■■□□□ 1.25
LIME1-203ENST00000465591 HMBSP08397 361 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 SETSIPP0DME0 302 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 GRIA2P42262 883 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 RGS7P49802 495 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 APBA1Q02410 837 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 GOLGA8FQ08AF8 430 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 GOLGA8DPQ0D2H9 430 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 CNGA2Q16280 664 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 DPCR1Q3MIW9 517 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 LAIR1Q6GTX8 287 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 PMF1Q6P1K2 205 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 GJB7Q6PEY0 223 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 CREBRFQ8IUR6 639 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 ALLCQ8N6M5 410 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 IL17RCQ8NAC3 791 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 MLKLQ8NB16 471 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 SLC35F5Q8WV83 523 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 GAB3Q8WWW8 586 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 KCTD13Q8WZ19 329 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 SECISBP2LQ93073 1101 aaKnown RBP22.84■■□□□ 1.25
LIME1-203ENST00000465591 LMBRD1Q9NUN5 540 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 MARK1Q9P0L2 795 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 HCN2Q9UL51 889 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 RAB23Q9ULC3 237 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 MMP17Q9ULZ9 603 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 CNTN6Q9UQ52 1028 aa22.84■■□□□ 1.25
LIME1-203ENST00000465591 YJEFN3A6XGL0 299 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.83■■□□□ 1.25
LIME1-203ENST00000465591 E7ENQ6 273 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 NEDD8-MDP1E9PL57 170 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 PIK3R2O00459 728 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 AXIN1O15169 862 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 TIE1P35590 1138 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 MRPS21P82921 87 aaKnown RBP22.83■■□□□ 1.25
LIME1-203ENST00000465591 BTBD8Q5XKL5 378 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 TMEM92Q6UXU6 159 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 CEP68Q76N32 757 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 TADA2BQ86TJ2 420 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 ARHGAP18Q8N392 663 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 FAM160A2Q8N612 972 aaPredicted RBP22.83■■□□□ 1.25
LIME1-203ENST00000465591 CDK5RAP1Q96SZ6 601 aaKnown RBP22.83■■□□□ 1.25
LIME1-203ENST00000465591 BBS2Q9BXC9 721 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 UBE2TQ9NPD8 197 aaPredicted RBP22.83■■□□□ 1.25
LIME1-203ENST00000465591 MARCH2Q9P0N8 246 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 GMEB2Q9UKD1 530 aa22.83■■□□□ 1.25
LIME1-203ENST00000465591 M0QYV0 167 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 SGK1O00141 431 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 RPP40O75818 363 aaKnown RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 KLF8O95600 359 aaPredicted RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 APBB3O95704 486 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 LCP1P13796 627 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 TYRP14679 529 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 SLC9A1P19634 815 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 RSRC2Q7L4I2 434 aaKnown RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 TERB1Q8NA31 727 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 TXNDC5Q8NBS9 432 aaKnown RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 EDEM1Q92611 657 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 BHMTQ93088 406 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 IPO9Q96P70 1041 aaKnown RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 NUP62CLQ9H1M0 184 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 DNAJC17Q9NVM6 304 aaKnown RBP22.82■■□□□ 1.24
LIME1-203ENST00000465591 DEC1Q9P2X7 70 aa22.82■■□□□ 1.24
LIME1-203ENST00000465591 SLC12A8A0AV02 714 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 TBC1D3BA6NDS4 549 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 CACNG3O60359 315 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 ADAM23O75077 832 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 CORO1AP31146 461 aaKnown RBP22.81■■□□□ 1.24
LIME1-203ENST00000465591 TNFRSF4P43489 277 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 DAOAP59103 153 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 COG7P83436 770 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 SPEM2Q0P670 501 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 CRY1Q16526 586 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 BSPRYQ5W0U4 402 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 TRIM65Q6PJ69 517 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 TOGARAM2Q6ZUX3 1019 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.81■■□□□ 1.24
LIME1-203ENST00000465591 KBTBD6Q86V97 674 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 SIX6OS1Q8N1H7 587 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 TSTD1Q8NFU3 115 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 CCDC26Q8TAB7 109 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 CLEC4CQ8WTT0 213 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 RMDN1Q96DB5 314 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 ACP6Q9NPH0 428 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 PLK2Q9NYY3 685 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 EBF1Q9UH73 591 aa22.81■■□□□ 1.24
LIME1-203ENST00000465591 AGO1Q9UL18 857 aaKnown RBP22.81■■□□□ 1.24
LIME1-203ENST00000465591 DCLK1O15075 740 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 RETP07949 1114 aa22.8■■□□□ 1.24
LIME1-203ENST00000465591 KRT5P13647 590 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms