RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
TRA2B-208ENST00000465245 MARCH9Q86YJ5 346 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 ADAM32Q8TC27 787 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 BHMTQ93088 406 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CRELD1Q96HD1 420 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CGRRF1Q99675 332 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 CDC6Q99741 560 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 KIAA1586Q9HCI6 787 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■■■■□ 21.9
TRA2B-208ENST00000465245 USP36Q9P275 1121 aaKnown RBP12.72□□□□□ -0.37
TRA2B-208ENST00000465245 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
TRA2B-208ENST00000465245 STON1Q9Y6Q2 735 aa12.72□□□□□ -0.37
TRA2B-208ENST00000465245 NUMA1Q14980 2115 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 TENM4Q6N022 2769 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 FAM92AA1XBS5 289 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 GREM1O60565 184 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 AP1G2O75843 785 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 TBX18O95935 607 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 CISD3P0C7P0 127 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 STAT6P42226 847 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 ABCG1P45844 678 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 BNC1Q01954 994 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 SNRNP35Q16560 246 aaKnown RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 HLA-BQ31612 363 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 SCUBE3Q8IX30 993 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 CCDC65Q8IXS2 484 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 RHBDD1Q8TEB9 315 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 TMX3Q96JJ7 454 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 KLF16Q9BXK1 252 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 MKRN2Q9H000 416 aaKnown RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 ITM2CQ9NQX7 267 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 TLR8Q9NR97 1041 aaKnown RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 KRT82Q9NSB4 513 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 COMMD8Q9NX08 183 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 PLK2Q9NYY3 685 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 EIF2B4Q9UI10 523 aaKnown RBP12.71□□□□□ -0.37
TRA2B-208ENST00000465245 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.37
TRA2B-208ENST00000465245 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.38
TRA2B-208ENST00000465245 A0A087WV48 116 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 KCNJ18B7U540 433 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 DKK1O94907 266 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
TRA2B-208ENST00000465245 OXTRP30559 389 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
TRA2B-208ENST00000465245 PGFP49763 221 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 TPMTP51580 245 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 MYL6P60660 151 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 PSMD6Q15008 389 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 PAQR9Q6ZVX9 377 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 SNX19Q92543 992 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CCDC127Q96BQ5 260 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 SIPA1Q96FS4 1042 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 UBL7Q96S82 380 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-208ENST00000465245 FBXO44Q9H4M3 255 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-208ENST00000465245 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRA2B-208ENST00000465245 BTBD3Q9Y2F9 522 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
TRA2B-208ENST00000465245 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 A0A1B0GVT2 93 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 FAM149AA5PLN7 773 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 SYNCRIPO60506 623 aaKnown RBP12.69□□□□□ -0.38
TRA2B-208ENST00000465245 PRB1P04280 392 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 ACADMP11310 421 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CCDC130P13994 396 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 ATICP31939 592 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 IL12RB1P42701 662 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CYP2J2P51589 502 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 ZNF132P52740 706 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CDH8P55286 799 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CYP24A1Q07973 514 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
TRA2B-208ENST00000465245 RABEP1Q15276 862 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 CCDC157Q569K6 752 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 SCARA5Q6ZMJ2 495 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 DBX2Q6ZNG2 339 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 TMPRSS6Q8IU80 811 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 FUKQ8N0W3 1084 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
TRA2B-208ENST00000465245 ZMIZ2Q8NF64 920 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 PIP4K2CQ8TBX8 421 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
TRA2B-208ENST00000465245 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
TRA2B-208ENST00000465245 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms