RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 BBS7Q8IWZ6 715 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 SCUBE3Q8IX30 993 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 ZNF276Q8N554 614 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 CLDN23Q96B33 292 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 PRRX2Q99811 253 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 KCNH6Q9H252 994 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 RBM12Q9NTZ6 932 aaKnown RBP17.85■□□□□ 0.45
VPS52-215ENST00000464425 TBC1D14Q9P2M4 693 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 CYTH4Q9UIA0 394 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 HELZP42694 1942 aaKnown RBP17.84■□□□□ 0.45
VPS52-215ENST00000464425 KIF26AQ9ULI4 1882 aaPredicted RBP17.84■□□□□ 0.45
VPS52-215ENST00000464425 ITIH6Q6UXX5 1313 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 H0Y858 1186 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 AP5Z1O43299 807 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 HMBSP08397 361 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 CHRNB1P11230 501 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 KRT9P35527 623 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 GALK1P51570 392 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 JAM2P57087 298 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 BPIFB4P59827 614 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 AMPD2Q01433 879 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 DHCR24Q15392 516 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 WDTC1Q8N5D0 677 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 KIAA1958Q8N8K9 716 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 RNF139Q8WU17 664 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 TRIM5Q9C035 493 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 NLRC4Q9NPP4 1024 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 SPATA6Q9NWH7 488 aaPredicted RBP17.84■□□□□ 0.45
VPS52-215ENST00000464425 MARCH2Q9P0N8 246 aa17.84■□□□□ 0.45
VPS52-215ENST00000464425 SLC12A8A0AV02 714 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 F8VZ95 297 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 GREM1O60565 184 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 FBXO21O94952 628 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 CYP17A1P05093 508 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 CYP11B1P15538 503 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 ACADSBP45954 432 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 MEA1Q16626 185 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 TAF3Q5VWG9 929 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 RHBDF2Q6PJF5 856 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 HTR3DQ70Z44 454 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 SCML4Q8N228 414 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 STK32AQ8WU08 396 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 IRGQQ8WZA9 623 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 SLC4A5Q9BY07 1137 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 FBRSL1Q9HCM7 1045 aaKnown RBP17.83■□□□□ 0.44
VPS52-215ENST00000464425 ABCC13Q9NSE7 274 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 LSM7Q9UK45 103 aaKnown RBP17.83■□□□□ 0.44
VPS52-215ENST00000464425 STRIP2Q9ULQ0 834 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 MYO6Q9UM54 1294 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.44
VPS52-215ENST00000464425 A0A1W2PQJ5 194 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 E5RJQ4 531 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 TRDMT1O14717 391 aaKnown RBP17.82■□□□□ 0.44
VPS52-215ENST00000464425 STC2O76061 302 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 GFPT2O94808 682 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 RPS9P46781 194 aaKnown RBP17.82■□□□□ 0.44
VPS52-215ENST00000464425 RPL34P49207 117 aaKnown RBP17.82■□□□□ 0.44
VPS52-215ENST00000464425 PTPN5P54829 565 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 COG7P83436 770 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 GRSF1Q12849 480 aaKnown RBP eCLIP17.82■□□□□ 0.44
VPS52-215ENST00000464425 PDCLQ13371 301 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 LY6G5CQ5SRR4 150 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 FSTL4Q6MZW2 842 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 CACNA2D4Q7Z3S7 1137 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 TMEM110Q86TL2 294 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 FMNL3Q8IVF7 1028 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 C1orf210Q8IVY1 113 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 GOLGA1Q92805 767 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 SPAG5Q96R06 1193 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 P2RY13Q9BPV8 354 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 TTYH3Q9C0H2 523 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 LHX5Q9H2C1 402 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 PDCL3Q9H2J4 239 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 TJP2Q9UDY2 1190 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 SFMBT1Q9UHJ3 866 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.82■□□□□ 0.443e-7■■■□□ 19.2
VPS52-215ENST00000464425 MIA3Q5JRA6 1907 aa17.82■□□□□ 0.44
VPS52-215ENST00000464425 FAM170AA1A519 330 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 PAPSS1O43252 624 aaPredicted RBP17.81■□□□□ 0.44
VPS52-215ENST00000464425 ADH1CP00326 375 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 LTFP02788 710 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 SOX5P35711 763 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 STAT1P42224 750 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 MTAPQ13126 283 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 LRRC32Q14392 662 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 ANGPT1Q15389 498 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 GAB4Q2WGN9 574 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 TMEM196Q5HYL7 178 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 DGKKQ5KSL6 1271 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 NOP9Q86U38 636 aaKnown RBP17.81■□□□□ 0.44
VPS52-215ENST00000464425 TMEM25Q86YD3 366 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 VSTM4Q8IW00 320 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 C1orf131Q8NDD1 294 aaKnown RBP17.81■□□□□ 0.44
VPS52-215ENST00000464425 CD101Q93033 1021 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 FAM149B1Q96BN6 582 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 OTUB2Q96DC9 234 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 MRFAP1L1Q96HT8 127 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 PPP1R13BQ96KQ4 1090 aa17.81■□□□□ 0.44
VPS52-215ENST00000464425 OLA1Q9NTK5 396 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms