RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FLRT2O43155 660 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 SYNCRIPO60506 623 aaKnown RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 PHACTR2O75167 634 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 AP1G2O75843 785 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 CISD3P0C7P0 127 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 ATXN1LP0C7T5 689 aaKnown RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 ACADMP11310 421 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 MYL6P60660 151 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 PSMD6Q15008 389 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 RABEP1Q15276 862 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 FUT11Q495W5 492 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 USP36Q9P275 1121 aaKnown RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
SMC1A-204ENST00000463684 PCDHGB2Q9Y5G2 931 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 MYOFQ9NZM1 2061 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 GCN1Q92616 2671 aaKnown RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 CEP192Q8TEP8 1941 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 NPC1O15118 1278 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 GREM1O60565 184 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 ZIC2O95409 532 aaPredicted RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 TBX18O95935 607 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 TPMTP51580 245 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 CDH8P55286 799 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 C19orf57Q0VDD7 668 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 E2F5Q15329 346 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 DBX2Q6ZNG2 339 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 PAQR9Q6ZVX9 377 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 SCUBE3Q8IX30 993 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 BAHD1Q8TBE0 780 aaPredicted RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 UCMAQ8WVF2 138 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 PRCCQ92733 491 aaPredicted RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 BHMTQ93088 406 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 SIPA1Q96FS4 1042 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 NUP58Q9BVL2 599 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 TOR4AQ9NXH8 423 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
SMC1A-204ENST00000463684 EIF2B4Q9UI10 523 aaKnown RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 FNDC3AQ9Y2H6 1198 aaKnown RBP15.28■□□□□ 0.04
SMC1A-204ENST00000463684 IGSF10Q6WRI0 2623 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 A0A087WV48 116 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 KCNJ18B7U540 433 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 PLA2G4AP47712 749 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 CYP24A1Q07973 514 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 TMPRSS6Q8IU80 811 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
SMC1A-204ENST00000463684 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 MKRN2Q9H000 416 aaKnown RBP15.27■□□□□ 0.04
SMC1A-204ENST00000463684 PLK2Q9NYY3 685 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 FBXO10Q9UK96 956 aa15.27■□□□□ 0.04
SMC1A-204ENST00000463684 SMG1Q96Q15 3661 aaKnown RBP15.27■□□□□ 0.03
SMC1A-204ENST00000463684 EIF3DO15371 548 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMC1A-204ENST00000463684 DKK1O94907 266 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 PGFP49763 221 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 CYP2J2P51589 502 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 AFF3P51826 1226 aaKnown RBP15.26■□□□□ 0.03
SMC1A-204ENST00000463684 MAP3K7CLP57077 242 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 ACOT1Q86TX2 421 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 MARCH9Q86YJ5 346 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 XXYLT1Q8NBI6 393 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF516Q92618 1163 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 HPS3Q969F9 1004 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 UBL7Q96S82 380 aaPredicted RBP15.26■□□□□ 0.03
SMC1A-204ENST00000463684 SMOQ99835 787 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 SMYD3Q9H7B4 428 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 CYLDQ9NQC7 956 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 THAP10Q9P2Z0 257 aaPredicted RBP15.26■□□□□ 0.03
SMC1A-204ENST00000463684 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMC1A-204ENST00000463684 SLC27A6Q9Y2P4 619 aa15.26■□□□□ 0.03
SMC1A-204ENST00000463684 MYO18AQ92614 2054 aaKnown RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 A0A1B0GVT2 93 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 VPS37CA5D8V6 355 aaPredicted RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CLIC2O15247 247 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 TNFSF14O43557 240 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 BEST1O76090 585 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 HOXD13P35453 343 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 IL12RB1P42701 662 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CSNK1EP49674 416 aaKnown RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 SNRPFP62306 86 aaKnown RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 BNC1Q01954 994 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
SMC1A-204ENST00000463684 BIRC3Q13489 604 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 TEAD4Q15561 434 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 CCDC157Q569K6 752 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ZMIZ2Q8NF64 920 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ADAM32Q8TC27 787 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 ZNF507Q8TCN5 953 aa15.25■□□□□ 0.03
SMC1A-204ENST00000463684 SNX19Q92543 992 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms