RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 HSF5Q4G112 596 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRIM61Q5EBN2 209 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 SPOPLQ6IQ16 392 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 FOXR2Q6PJQ5 311 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 SCARA5Q6ZMJ2 495 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ARMCX6Q7L4S7 300 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 TMEFF1Q8IYR6 380 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 TAS1R2Q8TE23 839 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 WBP2Q969T9 261 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 SYAP1Q96A49 352 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 DHTKD1Q96HY7 919 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 MED15Q96RN5 788 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 PNKPQ96T60 521 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 MMS19Q96T76 1030 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 B3GNT5Q9BYG0 378 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 GTPBP4Q9BZE4 634 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ELOVL4Q9GZR5 314 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 CLSTN2Q9H4D0 955 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 APOBEC3GQ9HC16 384 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 CD248Q9HCU0 757 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ARHGEF4Q9NR80 690 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 KIAA1468Q9P260 1216 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 PILRBQ9UKJ0 227 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 CTNND2Q9UQB3 1225 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 SETXQ7Z333 2677 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 HELZ2Q9BYK8 2649 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 TCRBV21S2A2A0A5A6 115 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 E2F8A0AVK6 867 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 FAM92AA1XBS5 289 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PSMA7O14818 248 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRIM24O15164 1050 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CETN3O15182 167 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 HOXC11O43248 304 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 COCHO43405 550 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 ADH1CP00326 375 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 APODP05090 189 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZDHHC11BP0C7U3 371 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 EPB41P11171 864 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 MBL2P11226 248 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 ENGP17813 658 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PTPN1P18031 435 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 ITPKAP23677 461 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 GNL1P36915 607 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 GRIA2P42262 883 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PIK3CAP42336 1068 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 ASPAP45381 313 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PGFP49763 221 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CDH8P55286 799 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TNNC1P63316 161 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 FKBP3Q00688 224 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRPC3Q13507 836 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CAMK4Q16566 473 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 UAP1L1Q3KQV9 507 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 WDR72Q3MJ13 1102 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CBWD6Q4V339 395 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CBWD3Q5JTY5 395 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CBWD5Q5RIA9 395 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 LY6G5CQ5SRR4 150 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SNX30Q5VWJ9 437 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PAQR9Q6ZVX9 377 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 LPCAT2Q7L5N7 544 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 PIP4P1Q86T03 277 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TTC30AQ86WT1 665 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 MIB1Q86YT6 1006 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SYT12Q8IV01 421 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 BBS7Q8IWZ6 715 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TRIML1Q8N9V2 468 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 B3GALNT2Q8NCR0 500 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SCAMP5Q8TAC9 235 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 GPT2Q8TD30 523 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 HMGB4Q8WW32 186 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 NELFBQ8WX92 580 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 OVCA2Q8WZ82 227 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SEMA4DQ92854 862 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SPACA7Q96KW9 195 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLITRK1Q96PX8 696 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TSG101Q99816 390 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 SCNM1Q9BWG6 230 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CCSER2Q9H7U1 834 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 TMEM8AQ9HCN3 771 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 IL37Q9NZH6 218 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 NXF1Q9UBU9 619 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 HMGXB4Q9UGU5 601 aa8.38□□□□□ -1.07
CDC42BPA-210ENST00000462553 CFAP46Q8IYW2 2715 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 A0A1W2PQF6 199 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 HYAL3O43820 417 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 GREM1O60565 184 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 PHACTR2O75167 634 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 TULP3O75386 442 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 ALDH1A2O94788 518 aa8.37□□□□□ -1.07
CDC42BPA-210ENST00000462553 ABL1P00519 1130 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms