RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 PLEKHA7Q6IQ23 1121 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 HPS6Q86YV9 775 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 NATD1Q8N6N6 113 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 TMEM102Q8N9M5 508 aaPredicted RBP9.53□□□□□ -0.88
LINC01140-201ENST00000461990 RASGRP4Q8TDF6 673 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 ZUFSPQ96AP4 578 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 TUBA1CQ9BQE3 449 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 CLPBQ9H078 707 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 CXorf21Q9HAI6 301 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 BCAP29Q9UHQ4 241 aa9.53□□□□□ -0.88
LINC01140-201ENST00000461990 UBR2Q8IWV8 1755 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 B8ZZF3 427 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 SLC26A4O43511 780 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 KLHL41O60662 606 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 LPXNO60711 386 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 GMNNO75496 209 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CLPXO76031 633 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 HSPA1AP0DMV8 641 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 HSPA1BP0DMV9 641 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CASP5P51878 434 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 IGBP1P78318 339 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 NIPAL4Q0D2K0 466 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CDC20Q12834 499 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 NFATC3Q12968 1075 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 UBAP2LQ14157 1087 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ZNF846Q147U1 533 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ATG16L1Q676U5 607 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 GADL1Q6ZQY3 521 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CYP4V2Q6ZWL3 525 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CPNE9Q8IYJ1 553 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 LILRA2Q8N149 483 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 MTMR9Q96QG7 549 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 AASDHPPTQ9NRN7 309 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 KCNN3Q9UGI6 736 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 PRPF19Q9UMS4 504 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 TRPM3Q9HCF6 1732 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ARHGEF37A1IGU5 675 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ARHGEF35A5YM69 484 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 I3L4J1 428 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 GIPC1O14908 333 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 SNNO75324 88 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 PROCP04070 461 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 NCAM1P13591 858 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 POLR2CP19387 275 aaPredicted RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 NR2F2P24468 414 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 CLK3P49761 638 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ALDH18A1P54886 795 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 TPTEP56180 551 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 PPM1LQ5SGD2 360 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 TUBA3EQ6PEY2 450 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 ETNPPLQ8TBG4 499 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 GRIN3AQ8TCU5 1115 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 DCAKDQ8WVC6 231 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 OSCP1Q8WVF1 389 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 SLC35C1Q96A29 364 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
LINC01140-201ENST00000461990 HERC2P3Q9BVR0 1158 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 PARVAQ9NVD7 372 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 GDAP2Q9NXN4 497 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 IL20Q9NYY1 176 aa9.52□□□□□ -0.89
LINC01140-201ENST00000461990 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 PRKAB2O43741 272 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 MYL4P12829 197 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 GYS1P13807 737 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 TMBIM6P55061 237 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 AQP5P55064 265 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 NLRP6P59044 892 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 PPP2R2BQ00005 443 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 KLF1Q13351 362 aaPredicted RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 KLHL38Q2WGJ6 581 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 NDUFAF5Q5TEU4 345 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 WDR78Q5VTH9 848 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 PPP1R2P3Q6NXS1 205 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 SPARTQ8N0X7 666 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 CAPSLQ8WWF8 208 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 CMTM5Q96DZ9 223 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 AGPAT1Q99943 283 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 FGFBP2Q9BYJ0 223 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 OR2B2Q9GZK3 357 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 NANOGQ9H9S0 305 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 HACD3Q9P035 362 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 SIRPGQ9P1W8 387 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 MAST2Q6P0Q8 1798 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 RBBP6Q7Z6E9 1792 aaKnown RBP9.51□□□□□ -0.89
LINC01140-201ENST00000461990 C7orf72A4D263 438 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 TSHRP16473 764 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 RFX1P22670 979 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 HPCAL1P37235 193 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 MESDQ14696 234 aa9.51□□□□□ -0.89
LINC01140-201ENST00000461990 DRAP1Q14919 205 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms