RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 EXTL3O43909 919 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CSDE1O75534 798 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 SNRPB2P08579 225 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CEBPBP17676 345 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CCNE1P24864 410 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 L1CAMP32004 1257 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 LIMS1P48059 325 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 KCNC1P48547 511 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 NT5C2P49902 561 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 FAM193AP78312 1265 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 RNASELQ05823 741 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 TRAF1Q13077 416 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 SEC23AQ15436 765 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 LONRF3Q496Y0 759 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 PABPC1LQ4VXU2 614 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 BICRALQ6AI39 1079 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 IQCEQ6IPM2 695 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 PCSK4Q6UW60 755 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 VITQ6UXI7 678 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CCNI2Q6ZMN8 369 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 MRPL10Q7Z7H8 261 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 MDM1Q8TC05 714 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 ING5Q8WYH8 240 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 ESR2Q92731 530 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 IPO9Q96P70 1041 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 BRD9Q9H8M2 597 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 DNMT3BQ9UBC3 853 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 FAN1Q9Y2M0 1017 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 PRG3Q9Y2Y8 225 aaPredicted RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 ZFHX3Q15911 3703 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 KNL1Q8NG31 2342 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 COL5A1P20908 1838 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 TSC2P49815 1807 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 MYO16Q9Y6X6 1858 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 A0A0D9SFI3 127 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 A0A1W2PQU0 124 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 PATE3B3GLJ2 98 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 H0Y626 953 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 ADAM12O43184 909 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 TRIM16O95361 564 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 CAVIN2O95810 425 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 ALDH2P05091 517 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 PXNP49023 591 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 SLURP1P55000 103 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 PPP2R2AP63151 447 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 SIM1P81133 766 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 SEMA3BQ13214 749 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 LRRC32Q14392 662 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 GRM4Q14833 912 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 FAM78AQ5JUQ0 283 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 DGKKQ5KSL6 1271 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 E4F1Q66K89 784 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 ZNF589Q86UQ0 364 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 METTL13Q8N6R0 699 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 LSM14AQ8ND56 463 aaKnown RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 KCTD13Q8WZ19 329 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 ZNF668Q96K58 619 aaPredicted RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 CLSTN3Q9BQT9 956 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 MCMBPQ9BTE3 642 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 AARSD1Q9BTE6 412 aaKnown RBP5.9□□□□□ -1.46
SPTA1-202ENST00000461624 LY9Q9HBG7 655 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 SNTG2Q9NY99 539 aa5.9□□□□□ -1.46
SPTA1-202ENST00000461624 PDZD2O15018 2839 aa5.9□□□□□ -1.47
SPTA1-202ENST00000461624 MTORP42345 2549 aa5.9□□□□□ -1.47
SPTA1-202ENST00000461624 MUC22E2RYF6 1773 aaPredicted RBP5.9□□□□□ -1.47
SPTA1-202ENST00000461624 CABIN1Q9Y6J0 2220 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 TRAV20A0A0B4J274 112 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 CCDC194A0A1B0GVG4 234 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 MEFVO15553 781 aaPredicted RBP5.89□□□□□ -1.47
SPTA1-202ENST00000461624 ANP32CO43423 234 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 SCG5P05408 212 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 GDI1P31150 447 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 ANP32AP39687 249 aaKnown RBP5.89□□□□□ -1.47
SPTA1-202ENST00000461624 ECI1P42126 302 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 RAB27AP51159 221 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 IRX4P78413 519 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 CREB5Q02930 508 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 SSRP1Q08945 709 aaKnown RBP5.89□□□□□ -1.47
SPTA1-202ENST00000461624 EFEMP1Q12805 493 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 DRP2Q13474 957 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 USP41Q3LFD5 358 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 SPATS1Q496A3 300 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 VWA3BQ502W6 1294 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 PPM1LQ5SGD2 360 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 UBXN11Q5T124 520 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 TWF2Q6IBS0 349 aaKnown RBP5.89□□□□□ -1.47
SPTA1-202ENST00000461624 PRSS55Q6UWB4 352 aaPredicted RBP5.89□□□□□ -1.47
SPTA1-202ENST00000461624 IQCA1Q86XH1 822 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 LRRC71Q8N4P6 559 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 URGCPQ8TCY9 931 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 RSPRY1Q96DX4 576 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 MCRS1Q96EZ8 462 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 MSANTD3Q96H12 275 aa5.89□□□□□ -1.47
SPTA1-202ENST00000461624 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms