RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 LCA5LO95447 670 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 GJB6O95452 261 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 NCAM1P13591 858 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 AVPR1AP37288 418 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 PITX1P78337 314 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-202ENST00000461433 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 FAM102AQ5T9C2 384 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-202ENST00000461433 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 ARCQ7LC44 396 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 DEFB106AQ8N104 65 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 C3orf20Q8ND61 904 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 WBP2Q969T9 261 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 ELSPBP1Q96BH3 223 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 PDLIM2Q96JY6 352 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 KXD1Q9BQD3 176 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 ADAM33Q9BZ11 813 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 GKN1Q9NS71 199 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 SFMBT1Q9UHJ3 866 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 STRIP2Q9ULQ0 834 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 CPQQ9Y646 472 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 NUMBLQ9Y6R0 609 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 SOWAHDA6NJG2 315 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 AKR1B10O60218 316 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 GREM1O60565 184 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ECI2O75521 394 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 DAB1O75553 588 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 IGLV3-25P01717 112 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MBL2P11226 248 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TCF3P15923 654 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 FLT3P36888 993 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 GALCP54803 685 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 GSDMDP57764 484 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 EFEMP1Q12805 493 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MAMLD1Q13495 774 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 EIF4EBP2Q13542 120 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MTF1Q14872 753 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 DCAF6Q58WW2 860 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 PLEKHA7Q6IQ23 1121 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 VITQ6UXI7 678 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RAD9BQ6WBX8 426 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 CELF5Q8N6W0 485 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 DQX1Q8TE96 717 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 NT5C3BQ969T7 300 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 CDK5RAP1Q96SZ6 601 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 BAG1Q99933 345 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 DEF6Q9H4E7 631 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 KCNK12Q9HB15 430 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ZFP14Q9HCL3 533 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 OBP2AQ9NY56 170 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MARCH2Q9P0N8 246 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 HEPACAM2A8MVW5 462 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 LEFTY2O00292 366 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ASGR2P07307 311 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TFE3P19532 575 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 NOS2P35228 1153 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MATKP42679 507 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ZNF77Q15935 545 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 OTUD1Q5VV17 481 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RSRC2Q7L4I2 434 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TADA2BQ86TJ2 420 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 EMC1Q8N766 993 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 SH3RF2Q8TEC5 729 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RNF139Q8WU17 664 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 GOLGA1Q92805 767 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 NPY6RQ99463 290 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 DDX23Q9BUQ8 820 aaKnown RBP11.78□□□□□ -0.52
SSBP1-202ENST00000461433 TRIM62Q9BVG3 475 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 SMOC2Q9H3U7 446 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 SMPD4Q9NXE4 827 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 CALCOCO1Q9P1Z2 691 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 IGSF9Q9P2J2 1179 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 RASAL2Q9UJF2 1139 aa11.78□□□□□ -0.52
SSBP1-202ENST00000461433 ANKRD62A6NC57 917 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 C2CD4BA6NLJ0 364 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 GOLGA6L6A8MZA4 724 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 CAPN9O14815 690 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
SSBP1-202ENST00000461433 KRT3P12035 628 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 ABCB4P21439 1286 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 RPL7AP62424 266 aaKnown RBP11.77□□□□□ -0.53
SSBP1-202ENST00000461433 FCHO2Q0JRZ9 810 aa11.77□□□□□ -0.53
SSBP1-202ENST00000461433 USP4Q13107 963 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms