RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ZNF618Q5T7W0 954 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ANKRD40Q6AI12 368 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 FAAH2Q6GMR7 532 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 KCNV1Q6PIU1 500 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 SYNE3Q6ZMZ3 975 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TRABD2AQ86V40 505 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 MYCBPAPQ8TBZ2 947 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 SLC22A17Q8WUG5 538 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ASB12Q8WXK4 309 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 EXTL1Q92935 676 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 SKA1Q96BD8 255 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 PGBD1Q96JS3 809 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 MAELQ96JY0 434 aaKnown RBP3.59□□□□□ -1.83
VCL-203ENST00000461383 PLEKHG4BQ96PX9 1271 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 WDR24Q96S15 920 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 GPR20Q99678 358 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ADAM2Q99965 735 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ALG8Q9BVK2 526 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 UNC45AQ9H3U1 944 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 SERHL2Q9H4I8 314 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TRIM36Q9NQ86 728 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 SMPD4Q9NXE4 827 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 EHD3Q9NZN3 535 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 KCND3Q9UK17 655 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 GJD2Q9UKL4 321 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 COL15A1P39059 1388 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ZAR1LA6NP61 321 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 EYA2O00167 538 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 MATN3O15232 486 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 LPXNO60711 386 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 MBD4O95243 580 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 DLDP09622 509 aaKnown RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 SRGNP10124 158 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 INSRRP14616 1297 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 CREB1P16220 341 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 ZNF37AP17032 561 aaPredicted RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 MMP8P22894 467 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 ELF1P32519 619 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 HTR7P34969 479 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 PTGS2P35354 604 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 MCM2P49736 904 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 TLE2Q04725 743 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 MAPK7Q13164 816 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 PDCLQ13371 301 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 CBFBQ13951 182 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 PUM1Q14671 1186 aaKnown RBP eCLIP3.58□□□□□ -1.84
VCL-203ENST00000461383 PLAC9Q5JTB6 97 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 TTC22Q5TAA0 569 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 DENND2CQ68D51 928 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 CCDC144NLQ6NUI1 221 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 RETSATQ6NUM9 610 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 MSANTD2Q6P1R3 559 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 DPY19L3Q6ZPD9 716 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 GPR149Q86SP6 731 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 HEATR4Q86WZ0 1026 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 HERC6Q8IVU3 1022 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 METTL25Q8N6Q8 603 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 SIRT6Q8N6T7 355 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 IL17DQ8TAD2 202 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 SOCS4Q8WXH5 440 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 FAR2Q96K12 515 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 TMX4Q9H1E5 349 aaPredicted RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 NRDE2Q9H7Z3 1164 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 WASH6PQ9NQA3 447 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 KLC4Q9NSK0 619 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 IRAK4Q9NWZ3 460 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 GGA3Q9NZ52 723 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 ANKFY1Q9P2R3 1169 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 DERAQ9Y315 318 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 REXO2Q9Y3B8 237 aaKnown RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 PCDHB7Q9Y5E2 793 aa3.58□□□□□ -1.84
VCL-203ENST00000461383 FNDC1Q4ZHG4 1894 aaPredicted RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 SETD1BQ9UPS6 1966 aaKnown RBP3.58□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3DA0A087WVF3 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3IA0A087WXS9 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3EA0A087X179 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3KA0A087X1G2 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 CCDC196A0A1B0GTZ2 297 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3BA6NDS4 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A18PA6NE21 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3FA6NER0 549 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A16PA6NEW6 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TMEM200CA6NKL6 621 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 A6NLC8 198 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A9PA6NNJ1 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 A8MVJ9 347 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A5PA8MXJ8 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3LB9A6J9 549 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 AP4M1O00189 453 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 SEPT4O43236 478 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 HOXC11O43248 304 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 CTIFO43310 598 aaKnown RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 ORC4O43929 436 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 PMPCBO75439 489 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TFRCP02786 760 aaKnown RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 ERBB2P04626 1255 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 IL6RP08887 468 aaPredicted RBP3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A15PP0C7V4 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 FAM90A14PP0C7W9 464 aa3.57□□□□□ -1.84
VCL-203ENST00000461383 TBC1D3HP0C7X1 549 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms