RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PAQR3Q6TCH7 311 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 PSPC1Q8WXF1 523 aaKnown RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 ASB15Q8WXK1 588 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 RAD54LQ92698 747 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 PEX11GQ96HA9 241 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 MAP7D2Q96T17 732 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 JPH2Q9BR39 696 aaPredicted RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 PANK2Q9BZ23 570 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 NT5C3AQ9H0P0 336 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 POLR3FQ9H1D9 316 aaPredicted RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 SEMA4AQ9H3S1 761 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 RC3H2Q9HBD1 1191 aaKnown RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 NUDT5Q9UKK9 219 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 CFAP45Q9UL16 551 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 ADGRA3Q8IWK6 1321 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 TCHHQ07283 1943 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 ABHD14A-ACY1A0A1B0GW23 586 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 M0QZ92 97 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 RPS6KA5O75582 802 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 BAIAP3O94812 1187 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 MMEP08473 750 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 RAC2P15153 192 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 MYOGP15173 224 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 HOXA11P31270 313 aaPredicted RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 ANP32AP39687 249 aaKnown RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 RABGGTBP53611 331 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 PTENP60484 403 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 PAN2Q504Q3 1202 aaKnown RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 RESP18Q5W5W9 173 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 ZNF410Q86VK4 478 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 EXOC8Q8IYI6 725 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 CMTR2Q8IYT2 770 aaKnown RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 USP38Q8NB14 1042 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 RNF149Q8NC42 400 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 AGBL5Q8NDL9 886 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 KCNG4Q8TDN1 519 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 TCP11Q8WWU5 503 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 SEPT8Q92599 483 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 FOXRED1Q96CU9 486 aaPredicted RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 NLRP4Q96MN2 994 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 ACAP3Q96P50 834 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 YBX2Q9Y2T7 364 aaKnown RBP8.78□□□□□ -1
ECHDC1-212ENST00000461239 COL4A6Q14031 1691 aa8.78□□□□□ -1
ECHDC1-212ENST00000461239 TRANK1O15050 2925 aa8.77□□□□□ -1
ECHDC1-212ENST00000461239 MICAL3Q7RTP6 2002 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 MYMKA6NI61 221 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 ASAP2O43150 1006 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 ACTN1P12814 892 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 ME1P48163 572 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 FAM189BP81408 668 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 CDC42EP1Q00587 391 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 MBTD1Q05BQ5 628 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 ADCY1Q08828 1119 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 GIT2Q14161 759 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 DHX8Q14562 1220 aaKnown RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 CXorf57Q6NSI4 855 aaKnown RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 CXorf67Q86X51 503 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 PDILTQ8N807 584 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 MCPH1Q8NEM0 835 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 LARP4BQ92615 738 aaKnown RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 APBB2Q92870 758 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 TOP1MTQ969P6 601 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 DNAJC19Q96DA6 116 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 CALML4Q96GE6 196 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 FIZ1Q96SL8 496 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 KIFC3Q9BVG8 833 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 NFKBIZQ9BYH8 718 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 GCOM2Q9BZD3 368 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 RNF32Q9H0A6 362 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 GOLPH3LQ9H4A5 285 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 PNMA8BQ9ULN7 279 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 HPSEQ9Y251 543 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 ANKRD6Q9Y2G4 727 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 SLC4A7Q9Y6M7 1214 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 REV3LO60673 3130 aa8.77□□□□□ -1.01
ECHDC1-212ENST00000461239 FAM237AA0A1B0GTK4 181 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 B4GALT5O43286 388 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 GJB5O95377 273 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 LINC00271P0C7V0 271 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 PF4V1P10720 104 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 FAHP16930 419 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 CMA1P23946 247 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 NPTX2P47972 431 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 ZNF131P52739 623 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 UBXN11Q5T124 520 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 RRAGBQ5VZM2 374 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 SRGAP1Q7Z6B7 1085 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 GPBP1Q86WP2 473 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 TP53INP2Q8IXH6 220 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 PHOSPHO2Q8TCD6 241 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 STAMQ92783 540 aa8.76□□□□□ -1.01
ECHDC1-212ENST00000461239 KIFAP3Q92845 792 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms