RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ZNF606Q8WXB4 792 aa23.58■■□□□ 1.37
TRAF4-207ENST00000461195 ATRIPQ8WXE1 791 aa23.58■■□□□ 1.37
TRAF4-207ENST00000461195 SHC3Q92529 594 aa23.58■■□□□ 1.37
TRAF4-207ENST00000461195 SPHK2Q9NRA0 654 aa23.58■■□□□ 1.37
TRAF4-207ENST00000461195 OLA1Q9NTK5 396 aaKnown RBP23.58■■□□□ 1.37
TRAF4-207ENST00000461195 MARCH2Q9P0N8 246 aa23.58■■□□□ 1.37
TRAF4-207ENST00000461195 ATG2BQ96BY7 2078 aa23.58■■□□□ 1.36
TRAF4-207ENST00000461195 YJEFN3A6XGL0 299 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 E7ENQ6 273 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 THAP12O43422 761 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 STC2O76061 302 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 EIF2DP41214 584 aaKnown RBP23.57■■□□□ 1.36
TRAF4-207ENST00000461195 DAOAP59103 153 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 CDKAL1Q5VV42 579 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 BSPRYQ5W0U4 402 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 C11orf57Q6ZUT1 292 aaPredicted RBP23.57■■□□□ 1.36
TRAF4-207ENST00000461195 ZBTB44Q8NCP5 570 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 CCDC26Q8TAB7 109 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 EZH1Q92800 747 aaPredicted RBP23.57■■□□□ 1.36
TRAF4-207ENST00000461195 DNAJC12Q9UKB3 198 aa23.57■■□□□ 1.36
TRAF4-207ENST00000461195 KIAA1549LQ6ZVL6 1849 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 CHURC1-FNTBB4DL54 471 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 PIK3R2O00459 728 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 HOXC11O43248 304 aaPredicted RBP23.56■■□□□ 1.36
TRAF4-207ENST00000461195 GABBR2O75899 941 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 GPD2P43304 727 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 SLC6A11P48066 632 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 DENND1BQ6P3S1 775 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 PKN3Q6P5Z2 889 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 TMEM25Q86YD3 366 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 RNF139Q8WU17 664 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 IRGQQ8WZA9 623 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 PNKPQ96T60 521 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 ACP6Q9NPH0 428 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 ABCC13Q9NSE7 274 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 C2orf42Q9NWW7 574 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 TAB2Q9NYJ8 693 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 AJAP1Q9UKB5 411 aaPredicted RBP23.56■■□□□ 1.36
TRAF4-207ENST00000461195 ZNF510Q9Y2H8 683 aa23.56■■□□□ 1.36
TRAF4-207ENST00000461195 SLC12A8A0AV02 714 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.55■■□□□ 1.36
TRAF4-207ENST00000461195 FBXO21O94952 628 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 HMBSP08397 361 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 FOXK2Q01167 660 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 KCNMA1Q12791 1236 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 ANO4Q32M45 955 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 Q6ZNB5 142 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 C12orf40Q86WS4 652 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 EDEM1Q92611 657 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 DCLK3Q9C098 648 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 TMEM63CQ9P1W3 806 aa23.55■■□□□ 1.36
TRAF4-207ENST00000461195 K7ESF4 209 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 TPM2P07951 284 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 ACADSBP45954 432 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 RPL34P49207 117 aaKnown RBP23.54■■□□□ 1.36
TRAF4-207ENST00000461195 MYL5Q02045 173 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 DPY19L2P1Q6NXN4 242 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 RPLP0P6Q8NHW5 317 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 STK32AQ8WU08 396 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 GOLGA1Q92805 767 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 ST7Q9NRC1 585 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 FANCLQ9NW38 375 aa23.54■■□□□ 1.36
TRAF4-207ENST00000461195 EP300Q09472 2414 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-207ENST00000461195 ZNF292O60281 2723 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 K7EQS6 105 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 LILRB5O75023 590 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 KAT7O95251 611 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 LMNAP02545 664 aaKnown RBP23.53■■□□□ 1.36
TRAF4-207ENST00000461195 KLKB1P03952 638 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 APODP05090 189 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 CORO1AP31146 461 aaKnown RBP23.53■■□□□ 1.36
TRAF4-207ENST00000461195 PTK2Q05397 1052 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 KRT31Q15323 416 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 PREPLQ4J6C6 727 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-207ENST00000461195 FMNL3Q8IVF7 1028 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 ETFBKMTQ8IXQ9 262 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 NAT16Q8N8M0 369 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 CLEC4CQ8WTT0 213 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 PLD4Q96BZ4 506 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 MIS12Q9H081 205 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 VPS16Q9H269 839 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 ARHGEF4Q9NR80 690 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 WDR35Q9P2L0 1181 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 SLC8A2Q9UPR5 921 aa23.53■■□□□ 1.36
TRAF4-207ENST00000461195 FOXN3O00409 490 aaPredicted RBP23.52■■□□□ 1.36
TRAF4-207ENST00000461195 LTFP02788 710 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 HOXA6P31267 233 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 GRIA2P42262 883 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 KDSRQ06136 332 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 TYRO3Q06418 890 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 KLHDC7AQ5VTJ3 777 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 TPGS1Q6ZTW0 290 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 ACDQ96AP0 544 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 LSM14BQ9BX40 385 aaKnown RBP23.52■■□□□ 1.36
TRAF4-207ENST00000461195 BBS2Q9BXC9 721 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 SLC4A5Q9BY07 1137 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 MARK1Q9P0L2 795 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 DEC1Q9P2X7 70 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 SFMBT1Q9UHJ3 866 aa23.52■■□□□ 1.36
TRAF4-207ENST00000461195 HBS1LQ9Y450 684 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms